RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CTSL3PQ5NE16 218 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 PDPK2PQ6A1A2 396 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 Q6ZPB1 254 aaPredicted RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 CENPUQ71F23 418 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 COMTD1Q86VU5 262 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 PAQR7Q86WK9 346 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 ZNF584Q8IVC4 421 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 NAXDQ8IW45 347 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 CCDC36Q8IYA8 594 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 PYROXD2Q8N2H3 581 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 TCAIMQ8N3R3 496 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 MLKLQ8NB16 471 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 KLHL30-AS1Q8NEE0 82 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 KCNG3Q8TAE7 436 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 VN1R17PQ8TDU5 208 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 TMEM37Q8WXS4 190 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 PINX1Q96BK5 328 aaKnown RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 HPDLQ96IR7 371 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 RPRD1AQ96P16 312 aaPredicted RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 ACCSQ96QU6 501 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 PANX2Q96RD6 677 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 RANBP9Q96S59 729 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 OMDQ99983 421 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 FAM173AQ9BQD7 235 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 LZTS2Q9BRK4 669 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 NDUFAF3Q9BU61 184 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 GEMIN7Q9H840 131 aaKnown RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 IMPAD1Q9NX62 359 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 GCNT4Q9P109 453 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 LCMT1Q9UIC8 334 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 ZNF490Q9ULM2 529 aaPredicted RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 PIGLQ9Y2B2 252 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 KLHDC2Q9Y2U9 406 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 C15orf41Q9Y2V0 281 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 ZNF175Q9Y473 711 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 NINLQ9Y2I6 1382 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 PTPRUQ92729 1446 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 TRAV25A0A0B4J276 109 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 A0A1W2PQ72 361 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 SNTNA6NMZ2 147 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 GOLGA8TH3BQL2 631 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 SAP18O00422 153 aaKnown RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CLDN5O00501 218 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 NBR2O15453 112 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 TIMM8AO60220 97 aaPredicted RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 RANBP6O60518 1105 aaKnown RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CLPXO76031 633 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 PDE5AO76074 875 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CRYGBP07316 175 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 ANXA4P09525 319 aaPredicted RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 PRKACAP17612 351 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 TSPAN8P19075 237 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 MAT2AP31153 395 aaKnown RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 FDFT1P37268 417 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 MAGEA8P43361 318 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 NPY2RP49146 381 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CSNK1EP49674 416 aaKnown RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CDH4P55283 916 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 XRCC4Q13426 336 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CD226Q15762 336 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 SYPL1Q16563 259 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 XKR7Q5GH72 579 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 TMEM225Q6GV28 225 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 TMEM220Q6QAJ8 160 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 SH2D6Q7Z4S9 175 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 LUZP2Q86TE4 346 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 PARGQ86W56 976 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 ERO1BQ86YB8 467 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CD302Q8IX05 232 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 EFCAB13Q8IY85 973 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 SLC38A6Q8IZM9 456 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 GTPBP8Q8N3Z3 284 aaPredicted RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 FAM81AQ8TBF8 368 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 MRAPQ8TCY5 172 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 OR1E3Q8WZA6 343 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 ST8SIA1Q92185 356 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 SLC25A36Q96CQ1 311 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 PPP1R16AQ96I34 528 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 C8orf76Q96K31 380 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 GSDMCQ9BYG8 508 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 NLNQ9BYT8 704 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 DNTTIP1Q9H147 329 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 BLZF1Q9H2G9 400 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 KAT8Q9H7Z6 458 aaKnown RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 SPACA1Q9HBV2 294 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 ESM1Q9NQ30 184 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 TIGARQ9NQ88 270 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 TNFRSF19Q9NS68 423 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 SMOXQ9NWM0 555 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 PIPOXQ9P0Z9 390 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 MIOXQ9UGB7 285 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 ZNF639Q9UID6 485 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 ANGPTL2Q9UKU9 493 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CA5BQ9Y2D0 317 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 BRD4O60885 1362 aaPredicted RBP2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 INSRP06213 1382 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 CARMIL1Q5VZK9 1371 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 ADAMTS9Q9P2N4 1935 aa2.95□□□□□ -1.94
SMARCA1-204ENST00000478420 A0A0J9YVX5 310 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 A0A1B0GVL5 298 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms