RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 TMEM135Q86UB9 458 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 VSIG1Q86XK7 387 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 SPANXA2-OT1Q8N9U9 137 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 ZNF680Q8NEM1 530 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 TSG101Q99816 390 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 PPDPFQ9H3Y8 114 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 DHX33Q9H6R0 707 aaKnown RBP-0.34□□□□□ -2.46
CALD1-218ENST00000478075 SGK2Q9HBY8 427 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 ZFP14Q9HCL3 533 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 TMEM106BQ9NUM4 274 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 BLOC1S4Q9NUP1 217 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 ACOXLQ9NUZ1 547 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 KLHL28Q9NXS3 571 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 TREM2Q9NZC2 230 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 GALPQ9UBC7 116 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 PLA2G4CQ9UP65 541 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 TMEM223A0PJW6 202 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 PLAC8L1A1L4L8 177 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 E9PBE3 544 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 XKRYO14609 159 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 ZNF207O43670 478 aaKnown RBP-0.35□□□□□ -2.47
CALD1-218ENST00000478075 BUB1O43683 1085 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 ECI2O75521 394 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 CPA3P15088 417 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 NPR2P20594 1047 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 GPM6AP51674 278 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 PRRX1P54821 245 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 FOXF1Q12946 379 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 CLPPQ16740 277 aaPredicted RBP-0.35□□□□□ -2.47
CALD1-218ENST00000478075 SLC39A12Q504Y0 691 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 TCP11X2Q5H9J9 407 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 DPY19L2P2Q6ZN68 376 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 TOM1L2Q6ZVM7 507 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 RIMKLAQ8IXN7 391 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 MLKLQ8NB16 471 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 OR6C4Q8NGE1 309 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 TIMM29Q9BSF4 260 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 ROGDIQ9GZN7 287 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 SRD5A3Q9H8P0 318 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 RETNQ9HD89 108 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 CCL28Q9NRJ3 127 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 PAK1IP1Q9NWT1 392 aaPredicted RBP-0.35□□□□□ -2.47
CALD1-218ENST00000478075 UVRAGQ9P2Y5 699 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 NAV2Q8IVL1 2488 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 COL7A1Q02388 2944 aa-0.35□□□□□ -2.47
CALD1-218ENST00000478075 ANKRD17O75179 2603 aaKnown RBP-0.35□□□□□ -2.47
CALD1-218ENST00000478075 COL4A1P02462 1669 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 PHF3Q92576 2039 aaKnown RBP-0.36□□□□□ -2.47
CALD1-218ENST00000478075 A8MXE2 369 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 H7C0S8 307 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 SGK1O00141 431 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 SLC30A4O14863 429 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 SIX3O95343 332 aaPredicted RBP-0.36□□□□□ -2.47
CALD1-218ENST00000478075 LALBAP00709 142 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 APRTP07741 180 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 HIST1H2AGP0C0S8 130 aaPredicted RBP-0.36□□□□□ -2.47
CALD1-218ENST00000478075 CGB7P0DN87 165 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 HERV-K104P63124 156 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 ACVR1Q04771 509 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 CHRNB3Q05901 458 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 CAMK2DQ13557 499 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 KYNUQ16719 465 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 RFX4Q33E94 735 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 BOLA3Q53S33 107 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 LRRC10Q5BKY1 277 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 SLX4IPQ5VYV7 408 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 HIST2H2AA3Q6FI13 130 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 PNCKQ6P2M8 343 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 LEG1Q6P5S2 330 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 NTM-AS1Q6ZSK4 140 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 CCDC186Q7Z3E2 898 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 SPATA19Q7Z5L4 167 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 NT5DC3Q86UY8 548 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 HIST2H2ABQ8IUE6 130 aaPredicted RBP-0.36□□□□□ -2.47
CALD1-218ENST00000478075 LGI3Q8N145 548 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 ST20-AS1Q8NBB2 130 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 CCDC54Q8NEL0 328 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 HIST1H2ACQ93077 130 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 RAB39BQ96DA2 213 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 PGLYRP4Q96LB8 373 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 PKMYT1Q99640 499 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 ANKRD2Q9GZV1 360 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 NAPBQ9H115 298 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 TM9SF3Q9HD45 589 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 ENTPD4Q9Y227 616 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 MRPS2Q9Y399 296 aaKnown RBP-0.36□□□□□ -2.47
CALD1-218ENST00000478075 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.36□□□□□ -2.47
CALD1-218ENST00000478075 CCL27Q9Y4X3 112 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 GMPPBQ9Y5P6 360 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 HEBP2Q9Y5Z4 205 aa-0.36□□□□□ -2.47
CALD1-218ENST00000478075 GPATCH8Q9UKJ3 1502 aaKnown RBP-0.37□□□□□ -2.47
CALD1-218ENST00000478075 MYO9BQ13459 2157 aa-0.37□□□□□ -2.47
CALD1-218ENST00000478075 ST8SIA3O43173 380 aa-0.37□□□□□ -2.47
CALD1-218ENST00000478075 ADAM12O43184 909 aa-0.37□□□□□ -2.47
CALD1-218ENST00000478075 STARD3NLO95772 234 aa-0.37□□□□□ -2.47
CALD1-218ENST00000478075 CCNE2O96020 404 aa-0.37□□□□□ -2.47
CALD1-218ENST00000478075 ZFYP08048 801 aaPredicted RBP-0.37□□□□□ -2.47
CALD1-218ENST00000478075 PTAFRP25105 342 aa-0.37□□□□□ -2.47
CALD1-218ENST00000478075 ADSSP30520 456 aa-0.37□□□□□ -2.47
CALD1-218ENST00000478075 RFC2P35250 354 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms