RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 PRAMEF27A3QJZ7 478 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 EIF1AYO14602 144 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 EFNA2O43921 213 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 BCAS1O75363 584 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CTAG2O75638 210 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 SYNGR4O95473 234 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 GSNP06396 782 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 TROVE2P10155 538 aaKnown RBP eCLIP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CD8BP10966 210 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 UQCRBP14927 111 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 APOBEC1P41238 236 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CRATP43155 626 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 DSTNP60981 165 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CHRNEQ04844 493 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 FOXF1Q12946 379 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 PON3Q15166 354 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 QPRTQ15274 297 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 POU4F3Q15319 338 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 GUSBP1Q15486 140 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CTU2Q2VPK5 515 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 BTLAQ7Z6A9 289 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 FUNDC1Q8IVP5 155 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 LILRA2Q8N149 483 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CNEP1R1Q8N9A8 125 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 FBXO27Q8NI29 283 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 VPS33AQ96AX1 596 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 GMPPAQ96IJ6 420 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 TACO1Q9BSH4 297 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 PAIP1Q9H074 479 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 OPN3Q9H1Y3 402 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CACYBPQ9HB71 228 aaKnown RBP12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 FANCFQ9NPI8 374 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 ZNF446Q9NWS9 450 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CCDC167Q9P0B6 97 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 CLEC4AQ9UMR7 237 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 IFT52Q9Y366 437 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 PCDHB14Q9Y5E9 798 aa12.38□□□□□ -0.43
SOX2-OT-208ENST00000477928 A0A0G2JPF8 293 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 A0A1W2PPR1 153 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 A8MXE2 369 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 HNRNPCL2B2RXH8 293 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 HNRNPCL3B7ZW38 293 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 CLIC1O00299 241 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 HNRNPCL1O60812 293 aaKnown RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 SMNDC1O75940 238 aaKnown RBP eCLIP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 THBS1P07996 1170 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 CHRM4P08173 479 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 TFPTP0C1Z6 253 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 UBTFL6P0CB48 400 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 HNRNPCL4P0DMR1 293 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 NID1P14543 1247 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 IL7RP16871 459 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 HOXB9P17482 250 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 CCKARP32238 428 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 CPOXP36551 454 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 KIR2DL2P43627 348 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 EIF1AXP47813 144 aaKnown RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 CLK1P49759 484 aaKnown RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 CARD18P57730 90 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 RNPS1Q15287 305 aaKnown RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 RGNQ15493 299 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 TESK1Q15569 626 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 MAPK14Q16539 360 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 SYPL1Q16563 259 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 LIN52Q52LA3 116 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 COX20Q5RI15 118 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 HBMQ6B0K9 141 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 PPP4R4Q6NUP7 873 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 FAM214BQ7L5A3 538 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 GRINAQ7Z429 371 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 SLC43A2Q8N370 569 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 TMCO5AQ8N6Q1 288 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 ANKFN1Q8N957 763 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 OR10D3Q8NH80 312 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 FAM222BQ8WU58 562 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 WDR60Q8WVS4 1066 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 STARD4Q96DR4 205 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 THUMPD3Q9BV44 507 aaKnown RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 PRRG4Q9BZD6 226 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 BCL2L10Q9HD36 194 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 SLC52A3Q9NQ40 469 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 DNAJB12Q9NXW2 375 aaKnown RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 LEF1Q9UJU2 399 aaPredicted RBP12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 EMC9Q9Y3B6 208 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 MPDZO75970 2070 aa12.37□□□□□ -0.43
SOX2-OT-208ENST00000477928 ANKRD17O75179 2603 aaKnown RBP12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 A0A0J9YW62 118 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 A6NNC1 897 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 ADSLP30566 484 aaPredicted RBP12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 CPA2P48052 419 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 CCR4P51679 360 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 RAC3P60763 192 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 FAM27E3Q08E93 113 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 LARS2Q15031 903 aaKnown RBP12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 AGKQ53H12 422 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 RNF220Q5VTB9 566 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 SLC2A7Q6PXP3 512 aa12.36□□□□□ -0.43
SOX2-OT-208ENST00000477928 ZNF474Q6S9Z5 364 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms