RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 THSD4Q6ZMP0 1018 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 OR2T11Q8NH01 316 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 CLHC1Q8NHS4 586 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 RFWD2Q8NHY2 731 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 PHOSPHO1Q8TCT1 267 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 FBXO17Q96EF6 278 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 OR5B2Q96R09 309 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 PAFAH2Q99487 392 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 INPP5KQ9BT40 448 aa8.53□□□□□ -1.04
COL4A5-204ENST00000477429 C12orf65Q9H3J6 166 aaKnown RBP8.53□□□□□ -1.04
COL4A5-204ENST00000477429 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 CCT8L1PA6NM43 557 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ZNF724A8MTY0 619 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ETV2O00321 342 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-204ENST00000477429 SCDO00767 359 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 PDPK1O15530 556 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ZSCAN12O43309 604 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 TCF21O43680 179 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 NUDT14O95848 222 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ZNF23P17027 643 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 PTAFRP25105 342 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 EIF1P41567 113 aaKnown RBP8.52□□□□□ -1.05
COL4A5-204ENST00000477429 FRKP42685 505 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-204ENST00000477429 PAFAH1B1P43034 410 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 PDLIM4P50479 330 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 P2RX1P51575 399 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 QPRTQ15274 297 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 TRIP10Q15642 601 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 TSNAXIP1Q2TAA8 658 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ARL13AQ5H913 290 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-204ENST00000477429 SLC25A53Q5H9E4 307 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 LIPNQ5VXI9 398 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ZNF544Q6NX49 715 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 CDC73Q6P1J9 531 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 C12orf54Q6X4T0 127 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 SZRD1Q7Z422 152 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 CCDC103Q8IW40 242 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ZNF100Q8IYN0 542 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ZCCHC24Q8N2G6 241 aaKnown RBP8.52□□□□□ -1.05
COL4A5-204ENST00000477429 SLC43A2Q8N370 569 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 COX18Q8N8Q8 333 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 CDRT4Q8N9R6 151 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 OR6Y1Q8NGX8 325 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 FAM120BQ96EK7 910 aaKnown RBP8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ARL5BQ96KC2 179 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 MUS81Q96NY9 551 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 FUT8Q9BYC5 575 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 SHCBP1LQ9BZQ2 653 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 SEC61A2Q9H9S3 476 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 C3orf14Q9HBI5 128 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 TIGARQ9NQ88 270 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 KLHL9Q9P2J3 617 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 BAIAP2L1Q9UHR4 511 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 EMCNQ9ULC0 261 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 MOKQ9UQ07 419 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 ACTL7BQ9Y614 415 aa8.52□□□□□ -1.05
COL4A5-204ENST00000477429 RYR1P21817 5038 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 IGKV3D-15A0A087WSY6 115 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 POC1B-GALNT4F8VUJ3 575 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 LILRA1O75019 489 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 IFI6P09912 130 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 SDC1P18827 310 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 APOBEC3AP31941 199 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-204ENST00000477429 GPC1P35052 558 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 DIO1P49895 249 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 PRKAA2P54646 552 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 PHC1P78364 1004 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 POU6F2P78424 691 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-204ENST00000477429 PLAURQ03405 335 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 LCP2Q13094 533 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 SQLEQ14534 574 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 LASP1Q14847 261 aaKnown RBP8.51□□□□□ -1.05
COL4A5-204ENST00000477429 TRIM46Q7Z4K8 759 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 GALNT5Q7Z7M9 940 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 P2RY8Q86VZ1 359 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 UBE2J2Q8N2K1 259 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 RFLNBQ8N5W9 214 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 JADE3Q92613 823 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 L3HYPDHQ96EM0 354 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 RADILQ96JH8 1075 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 MS4A4EQ96PG1 132 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 BTBD2Q9BX70 525 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 BHLHE41Q9C0J9 482 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-204ENST00000477429 CDC42EP4Q9H3Q1 356 aaKnown RBP8.51□□□□□ -1.05
COL4A5-204ENST00000477429 MID1IP1Q9NPA3 183 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 SLC17A5Q9NRA2 495 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 GIMAP2Q9UG22 337 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 PYCARDQ9ULZ3 195 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 MGAT4BQ9UQ53 548 aa8.51□□□□□ -1.05
COL4A5-204ENST00000477429 GPC6Q9Y625 555 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-204ENST00000477429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.51□□□□□ -1.05
COL4A5-204ENST00000477429 CIB4A0PJX0 185 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 TTC36A6NLP5 189 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 LYNX1G3V0Z9 82 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 KLF11O14901 512 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 DNAJA2O60884 412 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 ALX3O95076 343 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 STAMBPO95630 424 aa8.5□□□□□ -1.05
COL4A5-204ENST00000477429 HMGN2P05204 90 aaKnown RBP8.5□□□□□ -1.05
COL4A5-204ENST00000477429 ENO1P06733 434 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms