RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 BMPERQ8N8U9 685 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 BBS1Q8NFJ9 593 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 ZNF480Q8WV37 535 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 ACOT11Q8WXI4 607 aaPredicted RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 DIO2Q92813 273 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 PNPLA2Q96AD5 504 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 C12orf57Q99622 126 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 ARHGDIGQ99819 225 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 NKX6-2Q9C056 277 aaPredicted RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 BEX1Q9HBH7 125 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 CTPS2Q9NRF8 586 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 CNIH4Q9P003 139 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 KLHL9Q9P2J3 617 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 ZNF69Q9UC07 566 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 RCE1Q9Y256 329 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 SLC6A5Q9Y345 797 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 GSAPA4D1B5 854 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 SOCS6O14544 535 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 KLF4O43474 513 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 B4GALT2O60909 372 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 EGFP01133 1207 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 UBBP0CG47 229 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 UBCP0CG48 685 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 POU3F2P20265 443 aaPredicted RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 BUD31P41223 144 aaPredicted RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 PRLHRP49683 370 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 GMFBP60983 142 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 RPS27AP62979 156 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 UBA52P62987 128 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 ZNF77Q15935 545 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 RFLNAQ6ZTI6 216 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 CCDC36Q8IYA8 594 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 KRT78Q8N1N4 520 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 VN1R2Q8NFZ6 395 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 WFDC5Q8TCV5 224 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 LRRC46Q96FV0 321 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 CPEB1Q9BZB8 566 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 ARL6Q9H0F7 186 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 OR10A4Q9H209 315 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 AUNIPQ9H7T9 357 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 SLC13A4Q9UKG4 626 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 PLCL2Q9UPR0 1127 aa14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 MRPS7Q9Y2R9 242 aaKnown RBP14.17□□□□□ -0.14
CLSTN1-205ENST00000477264 C2orf16Q68DN1 1984 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 TCRBV16S1A1N1A0A5B0 115 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 UBE2QL1A1L167 161 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 F8W036 122 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 KRT33AO76009 404 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 EPXP11678 715 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 NDUFV2P19404 249 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 ARFIP1P53367 373 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 LSM11P83369 360 aaKnown RBP eCLIP14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 IER5LQ5T953 404 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 OR5M10Q6IEU7 315 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 OVCH1Q7RTY7 1134 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 CPOQ8IVL8 374 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 MMP21Q8N119 569 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 TRAM1L1Q8N609 369 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 PXT1Q8NFP0 134 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 FIBINQ8TAL6 211 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 C15orf40Q8WUR7 153 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 THEM6Q8WUY1 208 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 THAP4Q8WY91 577 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 OTUB2Q96DC9 234 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 SLC6A20Q9NP91 592 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 CA10Q9NS85 328 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 PRAMEF27A3QJZ7 478 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 SLC22A31A6NKX4 558 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 POM121CA8CG34 1229 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 TSPAN6O43657 245 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 C1orf105O95561 183 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 CH25HO95992 272 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 SNRPBP14678 240 aaKnown RBP14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 ATF1P18846 271 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 IL10RAQ13651 578 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 MPPED2Q15777 294 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 ACSM3Q53FZ2 586 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 SFRP5Q5T4F7 317 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 FAM27D1Q5T7N8 215 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 RAB11FIP2Q7L804 512 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 TMEM99Q8N816 258 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 OR6K3Q8NGY3 331 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 FANK1Q8TC84 345 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 SFXN5Q8TD22 340 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 BRIX1Q8TDN6 353 aaKnown RBP14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 XAGE5Q8WWM1 108 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 TM4SF18Q96CE8 201 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 TIMP4Q99727 224 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 SEC22CQ9BRL7 303 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 GAREM1Q9H706 876 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 NOX3Q9HBY0 568 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 CPNE7Q9UBL6 633 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 TRPC4Q9UBN4 977 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 B4GALT6Q9UBX8 382 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 FLVCR2Q9UPI3 526 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 PCDHGA9Q9Y5G4 932 aaKnown RBP14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 DENND4AQ7Z401 1863 aa14.16□□□□□ -0.14
CLSTN1-205ENST00000477264 MTX2O75431 263 aa14.15□□□□□ -0.14
CLSTN1-205ENST00000477264 RASGRP1O95267 797 aa14.15□□□□□ -0.14
CLSTN1-205ENST00000477264 PAPLNO95428 1278 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms