RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 ZP2Q05996 745 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 TSPAN31Q12999 210 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 SPHARQ15513 63 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 SSX1Q16384 188 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 CCDC157Q569K6 752 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 THSD4Q6ZMP0 1018 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 SLC46A3Q7Z3Q1 461 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 LRRC17Q8N6Y2 441 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 OR52I1Q8NGK6 324 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 TMEM239Q8WW34 195 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 PIGKQ92643 395 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 TRIM63Q969Q1 353 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 SHDQ96IW2 340 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 NEDD4LQ96PU5 975 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 IFT27Q9BW83 186 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 RANGRFQ9HD47 186 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 CUTCQ9NTM9 273 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 RPL36Q9Y3U8 105 aaKnown RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 ARRDC5A6NEK1 342 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 TLCD2A6NGC4 264 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 HRO43593 1189 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 REM1O75628 298 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 CFIP05156 583 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 IFNGR2P38484 337 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 OR51G2Q8NGK0 314 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 OR1L3Q8NH93 324 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 DYNC2LI1Q8TCX1 351 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 TRMT61AQ96FX7 289 aaKnown RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 RACGAP1Q9H0H5 632 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 HHATLQ9HCP6 504 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 DUSP22Q9NRW4 184 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 ERVK13-1Q9NX77 482 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 BRINP1O60477 761 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 SRPX2O60687 465 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 CTNSO60931 367 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 SOX30O94993 753 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 RPLP0P05388 317 aaKnown RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 CDH11P55287 796 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 CRYZQ08257 329 aaKnown RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 INSL4Q14641 139 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 CYP4Z2PQ8N1L4 340 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 FAM109AQ8N4B1 249 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 TOR1AIP2Q8NFQ8 470 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 OR9Q1Q8NGQ5 310 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 UBASH3BQ8TF42 649 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 ZDHHC12Q96GR4 267 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 MSANTD3Q96H12 275 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 SENP5Q96HI0 755 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 SLC38A2Q96QD8 506 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 TM9SF2Q99805 663 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 PRSS27Q9BQR3 290 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 HCAR1Q9BXC0 346 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 OR52D1Q9H346 318 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 SLC25A19Q9HC21 320 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 IGHV1OR21-1A0A087WYE8 117 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 A0A1B0GWA3 101 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 ATP6V1G2-DDX39BF2Z307 99 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 RGS5O15539 181 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 MPZL2O60487 215 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 GPX5O75715 221 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 AGR2O95994 175 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 HPGDP15428 266 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 NOS3P29474 1203 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 CDC20Q12834 499 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 MBOAT2Q6ZWT7 520 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 TMPRSS9Q7Z410 1059 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 GPR135Q8IZ08 494 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 IL17RDQ8NFM7 739 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 NLGN4YQ8NFZ3 816 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 C1orf216Q8TAB5 229 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 FANK1Q8TC84 345 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 PCNPQ8WW12 178 aaKnown RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-221ENST00000477203 CTHRC1Q96CG8 243 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 OPALINQ96PE5 141 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 SNTG1Q9NSN8 517 aa12.35□□□□□ -0.43
HDAC7-221ENST00000477203 B8ZZF3 427 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 POLR1CO15160 346 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-221ENST00000477203 CT45A8P0DMV1 189 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 CT45A9P0DMV2 189 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 AZGP1P25311 298 aaKnown RBP12.34□□□□□ -0.43
HDAC7-221ENST00000477203 STARD6P59095 220 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 CDK5Q00535 292 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 COX10Q12887 443 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 CT45A2Q5DJT8 189 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 ALG10BQ5I7T1 473 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 ZNF544Q6NX49 715 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 C10orf53Q8N6V4 93 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 BPIFA2Q96DR5 249 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 NECAB3Q96P71 396 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-221ENST00000477203 ADOQ96SZ5 270 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 SMOC1Q9H4F8 434 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 TMEM27Q9HBJ8 222 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 HINT3Q9NQE9 182 aaKnown RBP12.34□□□□□ -0.43
HDAC7-221ENST00000477203 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 PATE3B3GLJ2 98 aa12.34□□□□□ -0.43
HDAC7-221ENST00000477203 C10orf142B7Z368 130 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms