RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 GRIP2Q9C0E4 1043 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 SERHL2Q9H4I8 314 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 TIGARQ9NQ88 270 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 KLHL9Q9P2J3 617 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 LOC100289279A0A1B0GTE1 492 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 CIB4A0PJX0 185 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 TTC36A6NLP5 189 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 CCT8L1PA6NM43 557 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 ZNF716A6NP11 495 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 ATP6V1G2-DDX39BF2Z307 99 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 NPIPB9F8W1W9 429 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 GTPBP1O00178 669 aaKnown RBP10.5□□□□□ -0.73
HDAC6-219ENST00000476625 SLU7O95391 586 aaKnown RBP10.5□□□□□ -0.73
HDAC6-219ENST00000476625 PROCP04070 461 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 GSTA1P08263 222 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 IFI6P09912 130 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 MYL2P10916 166 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 LAMP1P11279 417 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 SLC25A16P16260 332 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 USF1P22415 310 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-219ENST00000476625 EIF1P41567 113 aaKnown RBP10.5□□□□□ -0.73
HDAC6-219ENST00000476625 DIO1P49895 249 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 RAC3P60763 192 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 TP53BP2Q13625 1128 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 ABLIM2Q6H8Q1 611 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 CCDC103Q8IW40 242 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 ZFP28Q8NHY6 868 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 FAM76AQ8TAV0 307 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 RADILQ96JH8 1075 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 PIGUQ9H490 435 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 HEATR1Q9H583 2144 aaKnown RBP10.5□□□□□ -0.73
HDAC6-219ENST00000476625 RRAGDQ9NQL2 400 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-219ENST00000476625 GPATCH2Q9NW75 528 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 TMEM160Q9NX00 188 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 C1orf109Q9NX04 203 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 STK38LQ9Y2H1 464 aa10.5□□□□□ -0.73
HDAC6-219ENST00000476625 GPC6Q9Y625 555 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-219ENST00000476625 NUP214P35658 2090 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-219ENST00000476625 LRP5LA4QPB2 252 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 CCDC151A5D8V7 595 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 GJE1A6NN92 205 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 VWC2LB2RUY7 222 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 H7C417 338 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 C6orf47O95873 294 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 C1QCP02747 245 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 DHRS4L1P0CG22 281 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 CCNA2P20248 432 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 ATP6V1C1P21283 382 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 IL2RGP31785 369 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 SERPINB4P48594 390 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 ETF1P62495 437 aaKnown RBP10.49□□□□□ -0.73
HDAC6-219ENST00000476625 GABRA6Q16445 453 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 MST1LQ2TV78 715 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 SLC25A53Q5H9E4 307 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 TMEM108Q6UXF1 575 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 GALNT5Q7Z7M9 940 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 SLC43A2Q8N370 569 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 FBXO17Q96EF6 278 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 ARL5BQ96KC2 179 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 OR7D2Q96RA2 312 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 CCT7Q99832 543 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 C1orf50Q9BV19 199 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 OR11A1Q9GZK7 315 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 L2HGDHQ9H9P8 463 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 GP6Q9HCN6 339 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 LPAR3Q9UBY5 353 aa10.49□□□□□ -0.73
HDAC6-219ENST00000476625 ZNF724A8MTY0 619 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 KIF2AO00139 706 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 LSM1O15116 133 aaKnown RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 ZNF264O43296 627 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 KIAA0513O60268 411 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 FCMRO60667 390 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 TBX19O60806 448 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 FAM153BP0C7A2 387 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 UBTFL6P0CB48 400 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 UROSP10746 265 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 UBL4AP11441 157 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 BCKDHAP12694 445 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 ITGA2P17301 1181 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 DDX5P17844 614 aaKnown RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 PRPH2P23942 346 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 NR4A2P43354 598 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 EFNA4P52798 201 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 ATP12AP54707 1039 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 SUMO3P55854 103 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 SESN3P58005 492 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 DSCR9P59020 149 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 PLAURQ03405 335 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 LGALS3BPQ08380 585 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 MERTKQ12866 999 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 SKP2Q13309 424 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 PTGR1Q14914 329 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 GPR68Q15743 365 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 MAPK14Q16539 360 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 FAM153CQ494X1 144 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 ARL13AQ5H913 290 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-219ENST00000476625 FBXW9Q5XUX1 488 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 FAM166AQ6J272 317 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 C3orf33Q6P1S2 294 aa10.48□□□□□ -0.73
HDAC6-219ENST00000476625 MTERF4Q7Z6M4 381 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms