RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 LRRC75A-AS1Q8N1F1 130 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 OR2L13Q8N349 312 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 CD177Q8N6Q3 437 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 LINC00612Q8N6U2 182 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 ZNF525Q8N782 197 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 FAF2Q96CS3 445 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 SLC25A38Q96DW6 304 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 MTMR9Q96QG7 549 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 TUBGCP2Q9BSJ2 902 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 CAPS2Q9BXY5 557 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 NAT10Q9H0A0 1025 aaKnown RBP4.37□□□□□ -1.71
VPS50-212ENST00000476413 VCPKMTQ9H867 229 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 WARS2Q9UGM6 360 aaKnown RBP4.37□□□□□ -1.71
VPS50-212ENST00000476413 FLVCR1Q9Y5Y0 555 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 PNPLA6Q8IY17 1366 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 RAI1Q7Z5J4 1906 aaPredicted RBP4.36□□□□□ -1.71
VPS50-212ENST00000476413 DHRS7CA6NNS2 312 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 ZNF208O43345 1280 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 UGT2B17O75795 530 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 GNA14O95837 355 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 P0C879 139 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 POLR2EP19388 210 aaKnown RBP4.36□□□□□ -1.71
VPS50-212ENST00000476413 VDAC1P21796 283 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 CALB2P22676 271 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 TNFRSF17Q02223 184 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 SLC1A5Q15758 541 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 ZNF239Q16600 458 aaKnown RBP4.36□□□□□ -1.71
VPS50-212ENST00000476413 SFT2D3Q587I9 215 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 BEND3Q5T5X7 828 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 METTL11BQ5VVY1 283 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 P2RY8Q86VZ1 359 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 SKA3Q8IX90 412 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 SVOPLQ8N434 492 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 IL4I1Q96RQ9 567 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 TBX15Q96SF7 602 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 ONECUT1Q9UBC0 465 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 ABCD2Q9UBJ2 740 aa4.36□□□□□ -1.71
VPS50-212ENST00000476413 KIF2AO00139 706 aaPredicted RBP4.35□□□□□ -1.71
VPS50-212ENST00000476413 NBR2O15453 112 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 PRKAB2O43741 272 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 CXCL13O43927 109 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 IGHV3-23P01764 117 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 NCK1P16333 377 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 IMPDH1P20839 514 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 GCKP35557 465 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 LEPP41159 167 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 CCT3P49368 545 aaKnown RBP4.35□□□□□ -1.71
VPS50-212ENST00000476413 TAF6P49848 677 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 EFNB2P52799 333 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 RIPK4P57078 832 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 C1orf220Q5T0J3 134 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 OLFML2AQ68BL7 652 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 OR4F3Q6IEY1 312 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 APOBEC3FQ8IUX4 373 aaKnown RBP4.35□□□□□ -1.71
VPS50-212ENST00000476413 NPY6RQ99463 290 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 ZBTB18Q99592 522 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 PARD6BQ9BYG5 372 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 SRXN1Q9BYN0 137 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 Q9H3A6 140 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 ZNF385DQ9H6B1 395 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 POPDC2Q9HBU9 364 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 FANCFQ9NPI8 374 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 ZNF275Q9NSD4 429 aaPredicted RBP4.35□□□□□ -1.71
VPS50-212ENST00000476413 VNN3Q9NY84 501 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 COX16Q9P0S2 106 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 CDH9Q9ULB4 789 aa4.35□□□□□ -1.71
VPS50-212ENST00000476413 IGHV1OR15-1A0A075B7D0 117 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 KLF18A0A0U1RQI7 1052 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 WWP2O00308 870 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 N4BP1O75113 896 aaKnown RBP4.34□□□□□ -1.71
VPS50-212ENST00000476413 LYPD3O95274 346 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 POU2F1P14859 743 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 FGF9P31371 208 aaPredicted RBP4.34□□□□□ -1.71
VPS50-212ENST00000476413 HLCSP50747 726 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 AANATQ16613 207 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 PAGE2BQ5JRK9 111 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 PDZK1Q5T2W1 519 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 FRA10AC1Q70Z53 315 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 FBXO16Q8IX29 292 aaPredicted RBP4.34□□□□□ -1.71
VPS50-212ENST00000476413 GPD1LQ8N335 351 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 CADM2Q8N3J6 435 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 MFSD9Q8NBP5 474 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 BHLHE23Q8NDY6 225 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 OR56B4Q8NH76 319 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 MS4A14Q96JA4 679 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 SMYD3Q9H7B4 428 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 NUDT15Q9NV35 164 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 HPCAL4Q9UM19 191 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 LRRK1Q38SD2 2015 aa4.34□□□□□ -1.71
VPS50-212ENST00000476413 SMIM28A0A1B0GU29 152 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 F5H6K3 240 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 PALMO75781 387 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 EPHX2P34913 555 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 UGT1A3P35503 534 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 PTGDSP41222 190 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 MAP3K8P41279 467 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 TDO2P48775 406 aa4.33□□□□□ -1.72
VPS50-212ENST00000476413 DAP3P51398 398 aaKnown RBP4.33□□□□□ -1.72
VPS50-212ENST00000476413 HNRNPA3P51991 378 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms