RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 BBOF1Q8ND07 529 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 RNF138Q8WVD3 245 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 SLC25A36Q96CQ1 311 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 ZNF799Q96GE5 643 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 ZNF285Q96NJ3 590 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 TESK2Q96S53 571 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 OMDQ99983 421 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 Q9H3A6 140 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 KAT8Q9H7Z6 458 aaKnown RBP4.27□□□□□ -1.73
SMC5-203ENST00000475540 MEPEQ9NQ76 525 aaPredicted RBP4.27□□□□□ -1.73
SMC5-203ENST00000475540 DUS2Q9NX74 493 aaKnown RBP4.27□□□□□ -1.73
SMC5-203ENST00000475540 PCSK1NQ9UHG2 260 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 PSME2Q9UL46 239 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 TTC41PQ6P2S7 1318 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 H3BMH7 237 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 EMC8O43402 210 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 TM7SF2O76062 418 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 IGFBP1P08833 259 aaPredicted RBP4.26□□□□□ -1.73
SMC5-203ENST00000475540 UQCRFS1P1P0C7P4 283 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 SLC35G4P0C7Q5 338 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 SLC2A3P11169 496 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 DBTP11182 482 aaKnown RBP4.26□□□□□ -1.73
SMC5-203ENST00000475540 TSPAN8P19075 237 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 GRIA1P42261 906 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 RPS6P62753 249 aaKnown RBP4.26□□□□□ -1.73
SMC5-203ENST00000475540 CSTF1Q05048 431 aaKnown RBP4.26□□□□□ -1.73
SMC5-203ENST00000475540 PJVKQ0ZLH3 352 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 CYP51A1Q16850 503 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 ARMC12Q5T9G4 340 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 IGFL2Q6UWQ7 119 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 P4HA3Q7Z4N8 544 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 FAM228AQ86W67 206 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 TGIF2LYQ8IUE0 185 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 EFCAB13Q8IY85 973 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 ARFGAP2Q8N6H7 521 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 ADAMTS16Q8TE57 1224 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 ELSPBP1Q96BH3 223 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 TADA1Q96BN2 335 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 TMEM43Q9BTV4 400 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 FAM192AQ9GZU8 254 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 DHX33Q9H6R0 707 aaKnown RBP4.26□□□□□ -1.73
SMC5-203ENST00000475540 MEAF6Q9HAF1 191 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 RNF6Q9Y252 685 aa4.26□□□□□ -1.73
SMC5-203ENST00000475540 A0A075B6Q4 140 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 TRAV26-1A0A087WT03 109 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 PPIAL4CA0A0B4J2A2 164 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 ARPC3O15145 178 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 CASC3O15234 703 aaKnown RBP4.25□□□□□ -1.73
SMC5-203ENST00000475540 CTAGE5O15320 804 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 OR1F1O43749 312 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 GSTT2P0CG29 244 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 GSTT2BP0CG30 244 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 PPIAL4GP0DN37 164 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 CYP11B1P15538 503 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 CYLC1P35663 651 aaPredicted RBP4.25□□□□□ -1.73
SMC5-203ENST00000475540 GNB2P62879 340 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 BCL2L1Q07817 233 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 FGL1Q08830 312 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 IFT88Q13099 833 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 ZNF57Q68EA5 555 aaPredicted RBP4.25□□□□□ -1.73
SMC5-203ENST00000475540 PYHIN1Q6K0P9 492 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 UFSP1Q6NVU6 142 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 PNCKQ6P2M8 343 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 Q6ZPB1 254 aaPredicted RBP4.25□□□□□ -1.73
SMC5-203ENST00000475540 TRPM8Q7Z2W7 1104 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 TMEM179BQ7Z7N9 219 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 LRRC75A-AS1Q8N1F1 130 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 FAM184AQ8NB25 1140 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 SYT14Q8NB59 555 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 CCDC148Q8NFR7 591 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 OR5AU1Q8NGC0 362 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 SLC2A14Q8TDB8 520 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 GIMAP1Q8WWP7 306 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 MARC2Q969Z3 335 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 AKR1E2Q96JD6 320 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 NPAS2Q99743 824 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 MTG1Q9BT17 334 aaPredicted RBP4.25□□□□□ -1.73
SMC5-203ENST00000475540 EHFQ9NZC4 300 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 GHRLQ9UBU3 117 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 WDR45Q9Y484 360 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 CCDC7Q96M83 1385 aa4.25□□□□□ -1.73
SMC5-203ENST00000475540 ARPC4-TTLL3A0A0A6YYG9 625 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 ERICH4A6NGS2 130 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 NCF1BA6NI72 391 aaPredicted RBP4.24□□□□□ -1.73
SMC5-203ENST00000475540 OR52A4PA6NMU1 304 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 WASHC1A8K0Z3 465 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 NCF1CA8MVU1 366 aaPredicted RBP4.24□□□□□ -1.73
SMC5-203ENST00000475540 B4DXG7 233 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 LATO43561 262 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 FCMRO60667 390 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 RAMP1O60894 148 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 NDUFB10O96000 172 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 PRB2P02812 416 aaPredicted RBP4.24□□□□□ -1.73
SMC5-203ENST00000475540 FGF4P08620 206 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 ANXA8P13928 327 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 MX1P20591 662 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 NT5EP21589 574 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 UQCRC2P22695 453 aa4.24□□□□□ -1.73
SMC5-203ENST00000475540 CDH5P33151 784 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms