RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 HEATR5AQ86XA9 2040 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 TRGV5A0A0B4J1U4 118 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 TRAPPC13A5PLN9 417 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 ELOA3DA6NLF2 546 aaPredicted RBP15.29■□□□□ 0.04
CCM2-205ENST00000472223 EIF4E1BA6NMX2 242 aaKnown RBP15.29■□□□□ 0.04
CCM2-205ENST00000472223 GJE1A6NN92 205 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 NPIPA5E9PKD4 350 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 hCG_2039718K7EN88 272 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 GNGT2O14610 69 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 OR5F1O95221 314 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 PNMTP11086 282 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 ZNF17P17021 662 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 PRKCAP17252 672 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 RHCEP18577 417 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 ERFP50548 548 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 MAP2K6P52564 334 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 ZNF136P52737 540 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 ST3GAL3Q11203 375 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 ELOA3BQ3SY89 546 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 ALG10BQ5I7T1 473 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 WIPI1Q5MNZ9 446 aaPredicted RBP15.29■□□□□ 0.04
CCM2-205ENST00000472223 SWT1Q5T5J6 900 aaKnown RBP15.29■□□□□ 0.04
CCM2-205ENST00000472223 ZFP1Q6P2D0 407 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 RBM45Q8IUH3 476 aaKnown RBP15.29■□□□□ 0.04
CCM2-205ENST00000472223 LACC1Q8IV20 430 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 FAM86B1Q8N7N1 296 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 ELOA3Q8NG57 546 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 PRRC1Q96M27 445 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 CCM2LQ9NUG4 571 aaPredicted RBP15.29■□□□□ 0.04
CCM2-205ENST00000472223 NPIPA1Q9UND3 350 aa15.29■□□□□ 0.04
CCM2-205ENST00000472223 C7orf72A4D263 438 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 TMEM229AB2RXF0 380 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 HNRNPRO43390 633 aaKnown RBP15.28■□□□□ 0.04
CCM2-205ENST00000472223 HCN1O60741 890 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 THRBP10828 461 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 FCGR1AP12314 374 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 TACR3P29371 465 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 SLC7A1P30825 629 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 YAP1P46937 504 aaKnown RBP15.28■□□□□ 0.04
CCM2-205ENST00000472223 CCNIQ14094 377 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 TOMM34Q15785 309 aaPredicted RBP15.28■□□□□ 0.04
CCM2-205ENST00000472223 POMZP3Q6PJE2 187 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 RRM2BQ7LG56 351 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 COMTD1Q86VU5 262 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 ADGRG5Q8IZF4 528 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 GTPBP8Q8N3Z3 284 aaPredicted RBP15.28■□□□□ 0.04
CCM2-205ENST00000472223 OR4D11Q8NGI4 311 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 ADAMTS16Q8TE57 1224 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 ZNF300Q96RE9 604 aaPredicted RBP15.28■□□□□ 0.04
CCM2-205ENST00000472223 TAAR6Q96RI8 345 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 CHID1Q9BWS9 393 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 DENND2DQ9H6A0 471 aaPredicted RBP15.28■□□□□ 0.04
CCM2-205ENST00000472223 ZDHHC11Q9H8X9 412 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 C12orf10Q9HB07 376 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 CTPS2Q9NRF8 586 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 RIMS3Q9UJD0 308 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 AP4S1Q9Y587 144 aa15.28■□□□□ 0.04
CCM2-205ENST00000472223 PCNX3Q9H6A9 2034 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 ATMQ13315 3056 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 TMED7-TICAM2A0A0A6YYA0 188 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 A0A1B0GWA3 101 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 ADAMDEC1O15204 470 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 SUSD5O60279 629 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 ZIC3O60481 467 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 FKBP6O75344 327 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 ACTL6AO96019 429 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 CHMP24386 653 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 ELK4P28324 431 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 PLAURQ03405 335 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 FOXF1Q12946 379 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 PIN1Q13526 163 aaPredicted RBP15.27■□□□□ 0.04
CCM2-205ENST00000472223 SLC25A53Q5H9E4 307 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 PIWIL3Q7Z3Z3 882 aaKnown RBP15.27■□□□□ 0.04
CCM2-205ENST00000472223 Q8NA96 180 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 PIK3C3Q8NEB9 887 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 FAR1Q8WVX9 515 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 SLC39A7Q92504 469 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 SLC41A3Q96GZ6 507 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 MPP4Q96JB8 637 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 C7orf34Q96L11 122 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 PIP5K1AQ99755 562 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 PRR14Q9BWN1 585 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 RSPO3Q9BXY4 272 aaPredicted RBP15.27■□□□□ 0.04
CCM2-205ENST00000472223 TSPAN10Q9H1Z9 355 aaPredicted RBP15.27■□□□□ 0.04
CCM2-205ENST00000472223 NDUFAF4Q9P032 175 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 TMED7Q9Y3B3 224 aa15.27■□□□□ 0.04
CCM2-205ENST00000472223 ITPR1Q14643 2758 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 OR2M5A3KFT3 312 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 H3BML4 177 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 CHP2O43745 196 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 ADAM11O75078 769 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 KRT36O76013 467 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 CST1P01037 141 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 H1F0P07305 194 aaKnown RBP15.26■□□□□ 0.03
CCM2-205ENST00000472223 TFPIP10646 304 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 PEPDP12955 493 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 POU3F2P20265 443 aaPredicted RBP15.26■□□□□ 0.03
CCM2-205ENST00000472223 HTR2AP28223 471 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 ARHGDIAP52565 204 aa15.26■□□□□ 0.03
CCM2-205ENST00000472223 VLDLRP98155 873 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms