RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 MSX2P35548 267 aaPredicted RBP11.12□□□□□ -0.63
PRKCB-205ENST00000472066 SLC1A3P43003 542 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 CA7P43166 264 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 ZNF136P52737 540 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 CLDN18P56856 261 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 RAC1P63000 192 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 MERTKQ12866 999 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 FXNQ16595 210 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 LRRC23Q53EV4 343 aaPredicted RBP11.12□□□□□ -0.63
PRKCB-205ENST00000472066 CYBRD1Q53TN4 286 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 C1QL3Q5VWW1 255 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 GLYATQ6IB77 296 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 ZNF585AQ6P3V2 769 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 PLEKHM3Q6ZWE6 761 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 ULK2Q8IYT8 1036 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 LILRA2Q8N149 483 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 ARHGAP24Q8N264 748 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 RELTQ969Z4 430 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 SLC7A6OSQ96CW6 309 aaPredicted RBP11.12□□□□□ -0.63
PRKCB-205ENST00000472066 ARHGDIGQ99819 225 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 ALKBH4Q9NXW9 302 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 STOML1Q9UBI4 398 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 SH3BGRL2Q9UJC5 107 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 BAG5Q9UL15 447 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 CAMK2AQ9UQM7 478 aa11.12□□□□□ -0.63
PRKCB-205ENST00000472066 A0A1B0GUH1 482 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 AHRRA9YTQ3 701 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 GYG2O15488 501 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 LRRTM2O43300 516 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 TPST2O60704 377 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 OPN1LWP04000 364 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 GABRA1P14867 456 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 ELK4P28324 431 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 APOBEC1P41238 236 aaKnown RBP11.11□□□□□ -0.63
PRKCB-205ENST00000472066 HTR3AP46098 478 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 SUCLG1P53597 346 aaKnown RBP11.11□□□□□ -0.63
PRKCB-205ENST00000472066 CLDN15P56746 228 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 CLDN20P56880 219 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 COPZ1P61923 177 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 SELENOWP63302 87 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 SRYQ05066 204 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 NRF1Q16656 503 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 WBP2NLQ6ICG8 309 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 C3P1Q6ZMU1 363 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 GRINAQ7Z429 371 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 ADGRG3Q86Y34 549 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 RBM45Q8IUH3 476 aaKnown RBP11.11□□□□□ -0.63
PRKCB-205ENST00000472066 UBQLNLQ8IYU4 475 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 CADM2Q8N3J6 435 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 LSMEM1Q8N8F7 131 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 OR4D11Q8NGI4 311 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 ZPLD1Q8TCW7 415 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 SMPDL3BQ92485 455 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 ZNF559Q9BR84 538 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 BTBD10Q9BSF8 475 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 ADAM19Q9H013 955 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 TP63Q9H3D4 680 aaPredicted RBP11.11□□□□□ -0.63
PRKCB-205ENST00000472066 GORASP2Q9H8Y8 452 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 CTPS2Q9NRF8 586 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 SERINC1Q9NRX5 453 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 ADPRHL2Q9NX46 363 aa11.11□□□□□ -0.63
PRKCB-205ENST00000472066 PRPF19Q9UMS4 504 aaKnown RBP11.11□□□□□ -0.63
PRKCB-205ENST00000472066 NINQ8N4C6 2090 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 TMED7-TICAM2A0A0A6YYA0 188 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 FIGNL2A6NMB9 653 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 H0Y3Z8 333 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 H0YC42 278 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 M0R3H8 397 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 CCL21O00585 134 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 WDR1O75083 606 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 GMNNO75496 209 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 ATP5HO75947 161 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 SERPINA1P01009 418 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 HOXD4P09016 255 aaPredicted RBP11.1□□□□□ -0.63
PRKCB-205ENST00000472066 ME2P23368 584 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 ACVR2AP27037 513 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 HTR2AP28223 471 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 TACR3P29371 465 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 POLR2HP52434 150 aaKnown RBP11.1□□□□□ -0.63
PRKCB-205ENST00000472066 TPD52P55327 224 aaPredicted RBP11.1□□□□□ -0.63
PRKCB-205ENST00000472066 RGS8P57771 180 aaPredicted RBP11.1□□□□□ -0.63
PRKCB-205ENST00000472066 SF3B4Q15427 424 aaKnown RBP eCLIP11.1□□□□□ -0.63
PRKCB-205ENST00000472066 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 C4orf17Q53FE4 359 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 RTL6Q6ICC9 239 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 POMZP3Q6PJE2 187 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 CBLL1Q75N03 491 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 GGNQ86UU5 652 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 FJX1Q86VR8 437 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 LACC1Q8IV20 430 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 MEIOBQ8N635 442 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 OR52E4Q8NGH9 312 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 OR6T1Q8NGN1 323 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 OR10Q1Q8NGQ4 319 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 VANGL1Q8TAA9 524 aaPredicted RBP11.1□□□□□ -0.63
PRKCB-205ENST00000472066 PROX1Q92786 737 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 FAM162AQ96A26 154 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 TPD52L3Q96J77 140 aa11.1□□□□□ -0.63
PRKCB-205ENST00000472066 TUBA1CQ9BQE3 449 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms