RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	IGHV3-15	A0A0B4J1V0	119 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	PRAMEF27	A3QJZ7	478 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	C5orf58	C9J3I9	102 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	MSTN	O14793	375 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	CASK	O14936	926 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	POU2F1	P14859	743 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	ADH6	P28332	368 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	KIR2DL2	P43627	348 aa	Predicted RBP	13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	SESN3	P58005	492 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	SQLE	Q14534	574 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	CTU2	Q2VPK5	515 aa	Known RBP	13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	C3orf33	Q6P1S2	294 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	LRRC74B	Q6ZQY2	392 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	FAM214B	Q7L5A3	538 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	CDH24	Q86UP0	819 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	ZNF610	Q8N9Z0	462 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	FAM222B	Q8WU58	562 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	CNOT9	Q92600	299 aa	Known RBP	13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	STARD4	Q96DR4	205 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	KLHL4	Q9C0H6	718 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	SLC38A1	Q9H2H9	487 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	RAD21L1	Q9H4I0	556 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	CALML5	Q9NZT1	146 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	JKAMP	Q9P055	326 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	TRIM33	Q9UPN9	1127 aa		13.27	□□□□□ -0.29
SSR4-208	ENST00000471880	ENO4	A6NNW6	628 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880		A8MXE2	369 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	CLIC1	O00299	241 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	ADAMDEC1	O15204	470 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	EFNA2	O43921	213 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	BCAS1	O75363	584 aa	Predicted RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	DBI	P07108	87 aa	Known RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	PABPC4L	P0CB38	370 aa	Known RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	ZCCHC18	P0CG32	403 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	UQCRB	P14927	111 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	PGM1	P36871	562 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	IDH2	P48735	452 aa	Known RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	CRISP3	P54108	245 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	FAM27E3	Q08E93	113 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	POU4F3	Q15319	338 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	TMEM201	Q5SNT2	666 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	PRR14L	Q5THK1	2151 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	GTF2IRD2B	Q6EKJ0	949 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	GTF2IRD2	Q86UP8	949 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	ST8SIA1	Q92185	356 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	GTF2H4	Q92759	462 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	CPNE4	Q96A23	557 aa	Predicted RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	ADGRG7	Q96K78	797 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	SLC39A3	Q9BRY0	314 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	SRXN1	Q9BYN0	137 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	PAIP1	Q9H074	479 aa	Known RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	SAP130	Q9H0E3	1048 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	NDRG3	Q9UGV2	375 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	PCDHB14	Q9Y5E9	798 aa		13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	SPIN1	Q9Y657	262 aa	Predicted RBP	13.26	□□□□□ -0.29
SSR4-208	ENST00000471880	F8	P00451	2351 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880		A0A096LPI6	279 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	SH3D21	A4FU49	640 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	AGAP5	A6NIR3	686 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	AP3D1	O14617	1153 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	EDF1	O60869	148 aa	Known RBP	13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	VIM	P08670	466 aa	Known RBP	13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	CAPN3	P20807	821 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	SORD	Q00796	357 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	ZNF239	Q16600	458 aa	Known RBP	13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	MRPL2	Q5T653	305 aa	Known RBP	13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	BLOC1S3	Q6QNY0	202 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	PLEKHM3	Q6ZWE6	761 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	STK32C	Q86UX6	486 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	VRK2	Q86Y07	508 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	FUNDC1	Q8IVP5	155 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	OR52P1P	Q8NH57	321 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	ABHD3	Q8WU67	409 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	NRGN	Q92686	78 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	ZNF524	Q96C55	264 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	TMEM19	Q96HH6	336 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	MED18	Q9BUE0	208 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	RABEP2	Q9H5N1	569 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	CTPS2	Q9NRF8	586 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	ACER3	Q9NUN7	267 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880	KLHL28	Q9NXS3	571 aa		13.25	□□□□□ -0.29
SSR4-208	ENST00000471880		A6NNC1	897 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	ANGPT2	O15123	496 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	GUSB	P08236	651 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	NUDT7	P0C024	238 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	TROVE2	P10155	538 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	EPX	P11678	715 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	CD79B	P40259	229 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	LARS2	Q15031	903 aa	Known RBP	13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	RGN	Q15493	299 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	LIN52	Q52LA3	116 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	PAGE3	Q5JUK9	113 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	ANKRD34A	Q69YU3	496 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	ALKBH2	Q6NS38	261 aa		13.24	□□□□□ -0.29
SSR4-208	ENST00000471880	FCRLA	Q7L513	359 aa		13.24	□□□□□ -0.29

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