RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 PYY3Q5JQD4 70 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ZNF626Q68DY1 528 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 REC114Q7Z4M0 266 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 HMGN2P46Q86SG4 172 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TMPRSS11BQ86T26 416 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 IQCHQ86VS3 1027 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TPRA1Q86W33 373 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 RBM45Q8IUH3 476 aaKnown RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 FOXRED2Q8IWF2 684 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ZNF433Q8N7K0 673 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 UBAC2Q8NBM4 344 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 DNAAF1Q8NEP3 725 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 OR1J4Q8NGS1 313 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 C1orf216Q8TAB5 229 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 NUBPLQ8TB37 319 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 DTD1Q8TEA8 209 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SMAP2Q8WU79 429 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 THEM6Q8WUY1 208 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 RGMAQ96B86 450 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ATG101Q9BSB4 218 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SOX7Q9BT81 388 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SPON2Q9BUD6 331 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 FAM124BQ9H5Z6 455 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 EGLN3Q9H6Z9 239 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ISG20L2Q9H9L3 353 aaKnown RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 TAS2R5Q9NYW4 299 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ZNF70Q9UC06 446 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 ZNF282Q9UDV7 671 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 IL20RAQ9UHF4 553 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SLC27A6Q9Y2P4 619 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CENPFP49454 3210 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 LOC100509620A0A075B734 347 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 MYBPHLA2RUH7 354 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SYNDIG1LA6NDD5 238 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 A6NJY4 79 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 PYCARD-AS1I3L0S3 204 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FAAHO00519 579 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 MED6O75586 246 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR2A4O95047 310 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SLC25A14O95258 325 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 C6orf47O95873 294 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ANXA5P08758 320 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ANXA4P09525 319 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 CPN1P15169 458 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 HOXB9P17482 250 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 AMD1P17707 334 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 LPOP22079 712 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 DDTP30046 118 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 DCTDP32321 178 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 TRHRP34981 398 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 RPL34P49207 117 aaKnown RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 ZNF140P52738 457 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 F2RL1P55085 397 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 CDH4P55283 916 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 NDUFA6P56556 154 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SEMG2Q02383 582 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 IRF8Q02556 426 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 TSTA3Q13630 321 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 COTL1Q14019 142 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ELAVL1Q15717 326 aaKnown RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 DACT2Q5SW24 774 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 TNFAIP8L2Q6P589 184 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 UNQ6494/PRO21346Q6UXR6 183 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 PAQR9Q6ZVX9 377 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 TMED4Q7Z7H5 227 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR2AK2Q8NG84 335 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR10H4Q8NGA5 316 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR10D4PQ8NGN7 298 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 BBS10Q8TAM1 723 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SLC7A13Q8TCU3 470 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 DUSP19Q8WTR2 217 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SMIM4Q8WVI0 70 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FCAMRQ8WWV6 532 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 KCTD13Q8WZ19 329 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 HIST1H2BAQ96A08 127 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ECHDC3Q96DC8 303 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 HSPA12BQ96MM6 686 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SPATA33Q96N06 139 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 TOX2Q96NM4 488 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR2A7Q96R45 310 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SMOQ99835 787 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SYT17Q9BSW7 474 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 C20orf24Q9BUV8 137 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FNDC11Q9BVV2 318 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 TTTY10Q9BZA0 68 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SLITRK2Q9H156 845 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 UQCC1Q9NVA1 299 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ASIC5Q9NY37 505 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 KLHL9Q9P2J3 617 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 GULP1Q9UBP9 304 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FBXW2Q9UKT8 454 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 AK6Q9Y3D8 172 aaKnown RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 A0A0C4DFX4 3053 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 A0A0D9SG52 128 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SMIM28A0A1B0GU29 152 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 TRAPPC13A5PLN9 417 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FAM183AA6NL82 134 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 IMPA2O14732 288 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FFAR1O14842 300 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 MBTPS2O43462 519 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms