RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 F10P00742 488 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 IGHDP01880 384 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 CD55P08174 381 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 NPIPA8P0DM63 369 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 PGCP20142 388 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 BCL3P20749 454 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 NF2P35240 595 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 XCR1P46094 333 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 DHPSP49366 369 aaPredicted RBP3.13□□□□□ -1.91
PRPF3-204ENST00000470824 VLDLRP98155 873 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 CHIT1Q13231 466 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 NDUFA9Q16795 377 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 TIMM50Q3ZCQ8 353 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 GGTA1PQ4G0N0 100 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 FAM120AOSQ5T036 256 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 ATF7IP2Q5U623 682 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 PVRIGQ6DKI7 326 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 TMEM225Q6GV28 225 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 FAHD2BQ6P2I3 314 aaPredicted RBP3.13□□□□□ -1.91
PRPF3-204ENST00000470824 NAXDQ8IW45 347 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 C15orf54Q8N8G6 183 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 STXBP6Q8NFX7 210 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 OR2T33Q8NG76 320 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 OR9A4Q8NGU2 314 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 ZNF606Q8WXB4 792 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 RPL3LQ92901 407 aaKnown RBP3.13□□□□□ -1.91
PRPF3-204ENST00000470824 FAHD2AQ96GK7 314 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 OR5B2Q96R09 309 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 CRNKL1Q9BZJ0 848 aaKnown RBP3.13□□□□□ -1.91
PRPF3-204ENST00000470824 PPDPFQ9H3Y8 114 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 PNO1Q9NRX1 252 aaKnown RBP3.13□□□□□ -1.91
PRPF3-204ENST00000470824 SMPD3Q9NY59 655 aaPredicted RBP3.13□□□□□ -1.91
PRPF3-204ENST00000470824 NPIPA1Q9UND3 350 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 RPH3ALQ9UNE2 315 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 SAMD4AQ9UPU9 718 aaKnown RBP3.13□□□□□ -1.91
PRPF3-204ENST00000470824 L3MBTL1Q9Y468 752 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 ALG6Q9Y672 507 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 MYOM2P54296 1465 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 C1orf167Q5SNV9 1468 aa3.13□□□□□ -1.91
PRPF3-204ENST00000470824 PIK3R4Q99570 1358 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 BLMP54132 1417 aaPredicted RBP3.12□□□□□ -1.91
PRPF3-204ENST00000470824 FER1L5A0AVI2 2057 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 COL5A2P05997 1499 aaPredicted RBP3.12□□□□□ -1.91
PRPF3-204ENST00000470824 BCL9LQ86UU0 1499 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 RALGAPBQ86X10 1494 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 SYNJ2BP-COX16A0A087WUM0 186 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 MSH4O15457 936 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 RIPK2O43353 540 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 ZNF354AO60765 605 aaPredicted RBP3.12□□□□□ -1.91
PRPF3-204ENST00000470824 H2BFMP0C1H6 154 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 SLC35E2P0CK97 266 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 HNF1AP20823 631 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 SERPINA2P20848 420 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 PTBP1P26599 531 aaKnown RBP eCLIP3.12□□□□□ -1.91
PRPF3-204ENST00000470824 HPCAL1P37235 193 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 ERVPABLB-1P60509 514 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 CD47Q08722 323 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 SERTAD2Q14140 314 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 DPYSL3Q14195 570 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 LAGE3Q14657 143 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 C15orf32Q32M92 178 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 RNLSQ5VYX0 342 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 CENPPQ6IPU0 288 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 FAM71F2Q6NXP2 309 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 C2orf66Q6UXQ4 117 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 C16orf62Q7Z3J2 963 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 DEFB132Q7Z7B7 95 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 LCA5Q86VQ0 697 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 SERPINA9Q86WD7 417 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 C9orf40Q8IXQ3 194 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 SLC38A6Q8IZM9 456 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 OR10A7Q8NGE5 316 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 CCDC26Q8TAB7 109 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 FAM3CQ92520 227 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 EMG1Q92979 244 aaKnown RBP3.12□□□□□ -1.91
PRPF3-204ENST00000470824 SH3YL1Q96HL8 342 aaPredicted RBP3.12□□□□□ -1.91
PRPF3-204ENST00000470824 C12orf66Q96MD2 445 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 AMDHD1Q96NU7 426 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 CCT8L2Q96SF2 557 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 CCT7Q99832 543 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 VCX2Q9H322 139 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 RSPH14Q9UHP6 348 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 CRYBG1Q9Y4K1 1723 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 FRMPD4Q14CM0 1322 aa3.12□□□□□ -1.91
PRPF3-204ENST00000470824 ANKRD50Q9ULJ7 1429 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 UTRNP46939 3433 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 PXDNQ92626 1479 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 PCNX3Q9H6A9 2034 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 H3BMQ9 156 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 BTN3A3O00478 584 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 OR7A17O14581 309 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 N4BP1O75113 896 aaKnown RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 DUSP14O95147 198 aaKnown RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 LRATO95237 230 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 ZNF44P15621 663 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 CALB2P22676 271 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 IGHV1-2P23083 117 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 SLC25A1P53007 311 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 RPL32P62910 135 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms