RNA–Protein interactions for RNA: ENST00000470742.5

ITSN1-224, Transcript of intersectin 1, human

TSL 4

Gene ITSN1, Length 474 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-224	ENST00000470742	TMEM176B	Q3YBM2	270 aa	Predicted RBP	18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	METTL21C	Q5VZV1	264 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	LUZP2	Q86TE4	346 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	MSRB3	Q8IXL7	192 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	PEX5L	Q8IYB4	626 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	ZNF563	Q8TA94	476 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	CNOT9	Q92600	299 aa	Known RBP	18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	OSTF1	Q92882	214 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	EXOSC3	Q9NQT5	275 aa	Known RBP	18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	ACER3	Q9NUN7	267 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	KCNN3	Q9UGI6	736 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	PACSIN3	Q9UKS6	424 aa		18.21	■□□□□ 0.51
ITSN1-224	ENST00000470742	ABCA4	P78363	2273 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	NUDT7	P0C024	238 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	CPA2	P48052	419 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	CARD18	P57730	90 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	SIRPA	P78324	504 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	PLAUR	Q03405	335 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	TLE4	Q04727	773 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	MERTK	Q12866	999 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	MYBPH	Q13203	477 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	TMEM19	Q96HH6	336 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	RBM24	Q9BX46	236 aa	Known RBP	18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	VAPA	Q9P0L0	249 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	LEF1	Q9UJU2	399 aa	Predicted RBP	18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	APC	P25054	2843 aa		18.2	■□□□□ 0.5
ITSN1-224	ENST00000470742	SMNDC1	O75940	238 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	BMP2	P12643	396 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	NID1	P14543	1247 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	PPIB	P23284	216 aa	Known RBP	18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	KIR2DL2	P43627	348 aa	Predicted RBP	18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	KIR2DL3	P43628	341 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	ARFIP2	P53365	341 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	MRPL2	Q5T653	305 aa	Known RBP	18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	VWA1	Q6PCB0	445 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	PLEKHM3	Q6ZWE6	761 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	KIF18B	Q86Y91	864 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	OR52P1P	Q8NH57	321 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	STARD4	Q96DR4	205 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	ZNF559	Q9BR84	538 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	CCDC134	Q9H6E4	229 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	TIGAR	Q9NQ88	270 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	SERINC1	Q9NRX5	453 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	DNAJB12	Q9NXW2	375 aa	Known RBP	18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	NDUFAF1	Q9Y375	327 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	DSPP	Q9NZW4	1301 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	TEX15	Q9BXT5	2789 aa		18.19	■□□□□ 0.5
ITSN1-224	ENST00000470742	TRBV5-3	A0A0A0MS03	114 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742		A0A0G2JPF8	293 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742		A8MXE2	369 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	HNRNPCL2	B2RXH8	293 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	HNRNPCL3	B7ZW38	293 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	HNRNPCL1	O60812	293 aa	Known RBP	18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	PLG	P00747	810 aa	Predicted RBP	18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	HNRNPCL4	P0DMR1	293 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	SLC7A1	P30825	629 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	SF3A3	Q12874	501 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	LIN52	Q52LA3	116 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	CGB2	Q6NT52	195 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	C3orf33	Q6P1S2	294 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	BTLA	Q7Z6A9	289 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	VRK2	Q86Y07	508 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	MAL2	Q969L2	176 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	COQ10B	Q9H8M1	238 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	CACYBP	Q9HB71	228 aa	Known RBP	18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	A4GALT	Q9NPC4	353 aa		18.18	■□□□□ 0.5
ITSN1-224	ENST00000470742	AKAP6	Q13023	2319 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	SPG11	Q96JI7	2443 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	C5orf58	C9J3I9	102 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	MSTN	O14793	375 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	ANGPT2	O15123	496 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	ADAM11	O75078	769 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	IDH2	P48735	452 aa	Known RBP	18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	CTBP2	P56545	445 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	GCNT6	Q5T4J0	391 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	DLEU7	Q6UYE1	221 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	ZNF836	Q6ZNA1	936 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	GRINA	Q7Z429	371 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	TSPEAR	Q8WU66	669 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	ROBO4	Q8WZ75	1007 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	CPNE4	Q96A23	557 aa	Predicted RBP	18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	REXO5	Q96IC2	774 aa	Known RBP	18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	GMPPA	Q96IJ6	420 aa	Predicted RBP	18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	SRXN1	Q9BYN0	137 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	MCCC2	Q9HCC0	563 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	GALNT8	Q9NY28	637 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	CLEC4A	Q9UMR7	237 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	ZNF232	Q9UNY5	417 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	CORO2B	Q9UQ03	480 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742	GMEB1	Q9Y692	573 aa		18.17	■□□□□ 0.5
ITSN1-224	ENST00000470742		A0A1W2PNR3	127 aa		18.16	■□□□□ 0.5
ITSN1-224	ENST00000470742	CDHR4	A6H8M9	788 aa		18.16	■□□□□ 0.5
ITSN1-224	ENST00000470742	EVPLL	A8MZ36	301 aa		18.16	■□□□□ 0.5
ITSN1-224	ENST00000470742	AP3D1	O14617	1153 aa		18.16	■□□□□ 0.5
ITSN1-224	ENST00000470742	PABPC4L	P0CB38	370 aa	Known RBP	18.16	■□□□□ 0.5
ITSN1-224	ENST00000470742	CPOX	P36551	454 aa		18.16	■□□□□ 0.5
ITSN1-224	ENST00000470742	MDH1	P40925	334 aa	Known RBP	18.16	■□□□□ 0.5
ITSN1-224	ENST00000470742	APOBEC1	P41238	236 aa	Known RBP	18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms