RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 FAM118AQ9NWS6 357 aa13.8□□□□□ -0.2
COL4A5-203ENST00000470339 PPP4R1LQ9P1A2 415 aa13.8□□□□□ -0.2
COL4A5-203ENST00000470339 POLHQ9Y253 713 aa13.8□□□□□ -0.2
COL4A5-203ENST00000470339 TMEM5Q9Y2B1 443 aa13.8□□□□□ -0.2
COL4A5-203ENST00000470339 SPTBN4Q9H254 2564 aa13.8□□□□□ -0.2
COL4A5-203ENST00000470339 CACNA1AO00555 2505 aa13.8□□□□□ -0.2
COL4A5-203ENST00000470339 E9PQ18 207 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 NKX2-8O15522 239 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 CDC40O60508 579 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL4A5-203ENST00000470339 SNX4O95219 450 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 IGF2P01344 180 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 GP1BBP13224 206 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 ITPKBP27987 946 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 HTR3AP46098 478 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 OMPP47874 163 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 GSSP48637 474 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 CYB561P49447 251 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 CTBP2P56545 445 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 ESRRGP62508 458 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 PRKCDQ05655 676 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 NPRL3Q12980 569 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 KCNAB2Q13303 367 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 IL18R1Q13478 541 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 COL28A1Q2UY09 1125 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 ZIK1Q3SY52 487 aaPredicted RBP13.79□□□□□ -0.2
COL4A5-203ENST00000470339 B3GNTL1Q67FW5 361 aaPredicted RBP13.79□□□□□ -0.2
COL4A5-203ENST00000470339 TTC33Q6PID6 262 aaPredicted RBP13.79□□□□□ -0.2
COL4A5-203ENST00000470339 ATG4DQ86TL0 474 aaPredicted RBP13.79□□□□□ -0.2
COL4A5-203ENST00000470339 CDK20Q8IZL9 346 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 BEST3Q8N1M1 668 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 GALNT16Q8N428 558 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 MARVELD2Q8N4S9 558 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 ZNF563Q8TA94 476 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
COL4A5-203ENST00000470339 TMEM255BQ8WV15 326 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 KCNE4Q8WWG9 221 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 TMEM234Q8WY98 164 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 ST8SIA1Q92185 356 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 NIPSNAP1Q9BPW8 284 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 TMEM43Q9BTV4 400 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 GRIP2Q9C0E4 1043 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 GALNT9Q9HCQ5 603 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 DKK4Q9UBT3 224 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 MED31Q9Y3C7 131 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 MPDZO75970 2070 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 AKAP13Q12802 2813 aa13.79□□□□□ -0.2
COL4A5-203ENST00000470339 ETV2O00321 342 aaPredicted RBP13.78□□□□□ -0.2
COL4A5-203ENST00000470339 MITFO75030 526 aaPredicted RBP13.78□□□□□ -0.2
COL4A5-203ENST00000470339 OSMP13725 252 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 FPR3P25089 353 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 CASRP41180 1078 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 ID4P47928 161 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 FOXK2Q01167 660 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 ALDH6A1Q02252 535 aaKnown RBP13.78□□□□□ -0.2
COL4A5-203ENST00000470339 CDC20Q12834 499 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 FOXD4Q12950 439 aaPredicted RBP13.78□□□□□ -0.2
COL4A5-203ENST00000470339 TSPAN31Q12999 210 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 KLHL17Q6TDP4 642 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 WDR88Q6ZMY6 472 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 USP51Q70EK9 711 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 PRICKLE2Q7Z3G6 844 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 GALNT5Q7Z7M9 940 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 CHERPQ8IWX8 916 aaKnown RBP13.78□□□□□ -0.2
COL4A5-203ENST00000470339 CYP4Z2PQ8N1L4 340 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 FADS6Q8N9I5 356 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 CYGBQ8WWM9 190 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 GTPBP3Q969Y2 492 aaKnown RBP13.78□□□□□ -0.2
COL4A5-203ENST00000470339 UTP23Q9BRU9 249 aaKnown RBP13.78□□□□□ -0.2
COL4A5-203ENST00000470339 TAS2R10Q9NYW0 307 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
COL4A5-203ENST00000470339 LOC100130705A0A1B0GUX0 176 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 ARGFXA6NJG6 315 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 ELOA3DA6NLF2 546 aaPredicted RBP13.77□□□□□ -0.21
COL4A5-203ENST00000470339 KLF4O43474 513 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 NUDT14O95848 222 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 P04436 131 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 WT1P19544 449 aaPredicted RBP13.77□□□□□ -0.21
COL4A5-203ENST00000470339 MYF6P23409 242 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 MAP2K6P52564 334 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 KEAP1Q14145 624 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 QPRTQ15274 297 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 ELOA3BQ3SY89 546 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 SLC25A53Q5H9E4 307 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 ATP1A1-AS1Q5TC04 95 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 ZNF468Q5VIY5 522 aaPredicted RBP13.77□□□□□ -0.21
COL4A5-203ENST00000470339 AGAP7PQ5VUJ5 663 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 BICRALQ6AI39 1079 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 ISLR2Q6UXK2 745 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 TMPRSS11FQ6ZWK6 438 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 GRINAQ7Z429 371 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 NRMQ8IXM6 262 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 ELOA3Q8NG57 546 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 OR2M3Q8NG83 312 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 RNF217Q8TC41 542 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 TMEM41AQ96HV5 264 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 AGAP4Q96P64 663 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 NR1H4Q96RI1 486 aaPredicted RBP13.77□□□□□ -0.21
COL4A5-203ENST00000470339 RNF32Q9H0A6 362 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 ING2Q9H160 280 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 PTGES2Q9H7Z7 377 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms