RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ABOP16442 354 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 BMP7P18075 431 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 GGT1P19440 569 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 CD247P20963 164 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 ACAA2P42765 397 aaKnown RBP13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 KCNJ5P48544 419 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 LHX2P50458 406 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 FOXF1Q12946 379 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 TOMM34Q15785 309 aaPredicted RBP13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 BCL2A1Q16548 175 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 ENPP6Q6UWR7 440 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 RINLQ6ZS11 566 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 COMTD1Q86VU5 262 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 PM20D2Q8IYS1 436 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 GPR32P1Q8NGA4 272 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 POC1BQ8TC44 478 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 ABTB1Q969K4 478 aaPredicted RBP13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 CDRT15Q96T59 188 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 KLHL28Q9NXS3 571 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 GMPR2Q9P2T1 348 aaKnown RBP13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 TESQ9UGI8 421 aaKnown RBP13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 RPH3AQ9Y2J0 694 aaPredicted RBP13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 SLC6A5Q9Y345 797 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 CSMD2Q7Z408 3487 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 NPIPA2E9PIF3 369 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 NPIPA3F8WFD2 350 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 CXCR6O00574 342 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 AP3D1O14617 1153 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 PRRG2O14669 202 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 TPST1O60507 370 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 LGI1O95970 557 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 CPN1P15169 458 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNF708P17019 499 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 CBX1P83916 185 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 DUSP7Q16829 419 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 GLIPR1L2Q4G1C9 344 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 DNAL1Q4LDG9 190 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 DCST1Q5T197 706 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 GRINAQ7Z429 371 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 SMYD1Q8NB12 490 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 SLC26A7Q8TE54 656 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNF524Q96C55 264 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 TIMP4Q99727 224 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 ACER3Q9NUN7 267 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 MAGEL2Q9UJ55 1249 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 SLC13A4Q9UKG4 626 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 BAG5Q9UL15 447 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 AP4B1Q9Y6B7 739 aa13.49□□□□□ -0.25
CDC42SE1-203ENST00000470278 ADGRG4Q8IZF6 3080 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 AKAP9Q99996 3911 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 FIGNL2A6NMB9 653 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 TMEM229AB2RXF0 380 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 GSTA4O15217 222 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 FMO6PO60774 539 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 WDR1O75083 606 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 ATP5HO75947 161 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 FESP07332 822 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 GKN3PP0CG01 181 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 PEPDP12955 493 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 POU3F2P20265 443 aaPredicted RBP13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 RYKP34925 604 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 PTGER4P35408 488 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 SLC1A3P43003 542 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 CA7P43166 264 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 HTR3AP46098 478 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNF136P52737 540 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 CLDN18P56856 261 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 RGS8P57771 180 aaPredicted RBP13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 SESN3P58005 492 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 BNIP2Q12982 314 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 SELENBP1Q13228 472 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 NRF1Q16656 503 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 LRRC23Q53EV4 343 aaPredicted RBP13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 CYBRD1Q53TN4 286 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 EMC4Q5J8M3 183 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 WLSQ5T9L3 541 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 CD163Q86VB7 1156 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 RNF148Q8N7C7 305 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 LSMEM1Q8N8F7 131 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 OR52E4Q8NGH9 312 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNF563Q8TA94 476 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 FIG4Q92562 907 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 SLC7A6OSQ96CW6 309 aaPredicted RBP13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 WDYHV1Q96HA8 205 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 NPAS1Q99742 590 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 ARHGDIGQ99819 225 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 GORASP2Q9H8Y8 452 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 STOML1Q9UBI4 398 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 ACAD8Q9UKU7 415 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNF337Q9Y3M9 751 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 PCNX1Q96RV3 2341 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 POLQO75417 2590 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 GTF3C1Q12789 2109 aa13.48□□□□□ -0.25
CDC42SE1-203ENST00000470278 SHISA8B8ZZ34 492 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 FRS3O43559 492 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 TPOP07202 933 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 PRG2P13727 222 aa13.47□□□□□ -0.25
CDC42SE1-203ENST00000470278 GABRA1P14867 456 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms