RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 CLOCKO15516 846 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 HNRNPRO43390 633 aaKnown RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 OR5F1O95221 314 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 CELA3AP09093 270 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 FREM3P0C091 2139 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ITGA2P17301 1181 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 DPP4P27487 766 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 SRD5A2P31213 254 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 SLC1A3P43003 542 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 LIMS1P48059 325 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 IST1P53990 364 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 CDH12P55289 794 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 DSCR4P56555 118 aaPredicted RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 B3GALT5-AS1P59052 145 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 LSM11P83369 360 aaKnown RBP eCLIP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 PMP22Q01453 160 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 RIPK1Q13546 671 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 GANABQ14697 944 aaKnown RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ATP6AP1Q15904 470 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ST3GAL2Q16842 350 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 WBP2NLQ6ICG8 309 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 OR2T5Q6IEZ7 315 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 RPUSD3Q6P087 351 aaKnown RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 PLEKHM3Q6ZWE6 761 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 GDF7Q7Z4P5 450 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 TMEM179BQ7Z7N9 219 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 AMIGO2Q86SJ2 522 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ATG4DQ86TL0 474 aaPredicted RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 RANBP3LQ86VV4 465 aaPredicted RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ADGRG3Q86Y34 549 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 NKAIN4Q8IVV8 208 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 OFCC1Q8IZS5 231 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 CADM2Q8N3J6 435 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 Q8NA96 180 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 OR4C15Q8NGM1 316 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 OR2T29Q8NH02 315 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ST8SIA1Q92185 356 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 SLC38A4Q969I6 547 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 SLC41A3Q96GZ6 507 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ZNF347Q96SE7 839 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ZNF426Q9BUY5 554 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 OR2B2Q9GZK3 357 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 POLR2J2Q9GZM3 115 aaKnown RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 POLR2J3Q9H1A7 115 aaKnown RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 ZNF703Q9H7S9 590 aaPredicted RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 TMEM27Q9HBJ8 222 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 AGPAT4Q9NRZ5 378 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 DNAJB9Q9UBS3 223 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 NKX1-2Q9UD57 310 aaPredicted RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 OSGIN1Q9UJX0 560 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 BOKQ9UMX3 212 aaPredicted RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 USP24Q9UPU5 2620 aa10.2□□□□□ -0.78
SREBF1-209ENST00000470247 TLN1Q9Y490 2541 aaKnown RBP10.2□□□□□ -0.78
SREBF1-209ENST00000470247 A0A087WZY1 265 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 A0A1W2PRQ8 180 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 C7orf72A4D263 438 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 H0YHG0 523 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 NUDT14O95848 222 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 CST1P01037 141 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 HPNP05981 417 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 THRBP10828 461 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 ANPEPP15144 967 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 IL11P20809 199 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 FASP25445 335 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 TACR3P29371 465 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 RRM2P31350 389 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 MAGEA5P43359 124 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 TAS2R41P59536 307 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 PPIAP62937 165 aaKnown RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 ST3GAL3Q11203 375 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 FOXF1Q12946 379 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 PPP1R8Q12972 351 aaKnown RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 DGCR6Q14129 220 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 RCN1Q15293 331 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 SEC23BQ15437 767 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 GLYR1Q49A26 553 aaPredicted RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 ULK3Q6PHR2 472 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 GRINAQ7Z429 371 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 YRDCQ86U90 279 aaKnown RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 SIAH3Q8IW03 269 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 PQLC1Q8N2U9 271 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 GTPBP8Q8N3Z3 284 aaPredicted RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 FAM83FQ8NEG4 500 aaPredicted RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 ZNF563Q8TA94 476 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 DNAJA4Q8WW22 397 aaPredicted RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 PNPLA2Q96AD5 504 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 MRGPRX4Q96LA9 322 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 UBL7Q96S82 380 aaPredicted RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 ARHGAP9Q9BRR9 750 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 FNDC11Q9BVV2 318 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 PTGES2Q9H7Z7 377 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 YY1AP1Q9H869 796 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 ZDHHC11Q9H8X9 412 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 C12orf10Q9HB07 376 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 VDAC3Q9Y277 283 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 FAM32AQ9Y421 112 aaKnown RBP10.19□□□□□ -0.78
SREBF1-209ENST00000470247 TESMINQ9Y4I5 508 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 LYVE1Q9Y5Y7 322 aa10.19□□□□□ -0.78
SREBF1-209ENST00000470247 ATRXP46100 2492 aa10.18□□□□□ -0.78
SREBF1-209ENST00000470247 PIEZO2Q9H5I5 2752 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms