RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 A0A1W2PS29 197 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 C12orf71A8MTZ7 269 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 GABRPO00591 440 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 CYR61O00622 381 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 POLR1CO15160 346 aaPredicted RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 RNF13O43567 381 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 SRPX2O60687 465 aaPredicted RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 LDB3O75112 727 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 NKX2-2O95096 273 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 ADRA2AP08913 450 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 PRG2P13727 222 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 GABRG2P18507 467 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 RFX3P48380 749 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 ZNF136P52737 540 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 GAS1P54826 345 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 CTBP2P56545 445 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 ACTA2P62736 377 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 ACTG2P63267 376 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 FABP5Q01469 135 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 EXOSC7Q15024 291 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 PRICKLE4Q2TBC4 344 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 ZNF791Q3KP31 576 aaPredicted RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 TRMT12Q53H54 448 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 ULK3Q6PHR2 472 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 PLET1Q6UQ28 207 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 RTL4Q6ZR62 310 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 GDPD3Q7L5L3 318 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 OAFQ86UD1 273 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 TPRA1Q86W33 373 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 PARGQ86W56 976 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 MEX3DQ86XN8 651 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 GRAMD2AQ8IUY3 354 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 ZNF595Q8IYB9 648 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 OR4N4Q8N0Y3 316 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 C19orf47Q8N9M1 422 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 ZNF527Q8NB42 609 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 OR4F15Q8NGB8 312 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 OR6C4Q8NGE1 309 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 OR52R1Q8NGF1 315 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 UBASH3BQ8TF42 649 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 DNAJA4Q8WW22 397 aaPredicted RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 FGF11Q92914 225 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 RIT1Q92963 219 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 ZG16BQ96DA0 208 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 RBM18Q96H35 190 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 DEPDC7Q96QD5 511 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 CCNL2Q96S94 520 aaPredicted RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 TM9SF2Q99805 663 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 LMF2Q9BU23 707 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 KATNB1Q9BVA0 655 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 TWSG1Q9GZX9 223 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 LIN7BQ9HAP6 207 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 CAPN10Q9HC96 672 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 HINT3Q9NQE9 182 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 DDX28Q9NUL7 540 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 BABAM2Q9NXR7 383 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 COMMD3Q9UBI1 195 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 PRODH2Q9UF12 536 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 CD207Q9UJ71 328 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 MRTO4Q9UKD2 239 aaKnown RBP7.39□□□□□ -1.23
SMC4-212ENST00000470240 POMT2Q9UKY4 750 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 OR10H1Q9Y4A9 318 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 V9GYH0 126 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 LRP4O75096 1905 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 SPTY2D1-AS1A0A0U1RR47 76 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 A0A1W2PQ09 198 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 GXYLT2A0PJZ3 443 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 EPOPA6NHQ4 379 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 EFCAB7A8K855 629 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 B4DGG1 531 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 IDH3BO43837 385 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 ADAM11O75078 769 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 TRIM3O75382 744 aaPredicted RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 RDH16O75452 317 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 KCNK2O95069 426 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 MSL3P1P0C860 447 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 GKN3PP0CG01 181 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 THEGLP0DJG4 465 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 PVRP15151 417 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 HPGDP15428 266 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 DRD5P21918 477 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 MRPS15P82914 257 aaKnown RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 IL18Q14116 193 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 SERTAD2Q14140 314 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 GALEQ14376 348 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 GLYR1Q49A26 553 aaPredicted RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 ZFP69Q49AA0 526 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 CCDC92Q53HC0 331 aaPredicted RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 ALG10BQ5I7T1 473 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 EXOSC6Q5RKV6 272 aaKnown RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 HACD4Q5VWC8 232 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 BICRALQ6AI39 1079 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 Q6ZS46 218 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 GKN2Q86XP6 184 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 KLBQ86Z14 1044 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 MS4A15Q8N5U1 240 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 POMGNT2Q8NAT1 580 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 OR13C2Q8NGS9 318 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 GRHL3Q8TE85 626 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms