RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SERINC1Q9NRX5 453 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 EXD2Q9NVH0 621 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 ING1Q9UK53 422 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-208ENST00000470076 PCDHGB4Q9UN71 923 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 IGHV3-15A0A0B4J1V0 119 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF814B7Z6K7 855 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 CLOCKO15516 846 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 FCMRO60667 390 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 CYTIPO60759 359 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 UGT2B17O75795 530 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 CYP7B1O75881 506 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 AGR2O95994 175 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 CSTAP01040 98 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 PGCP20142 388 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 PCSK6P29122 969 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 PPP2R2BQ00005 443 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 RASGEF1BQ0VAM2 473 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 CAPRIN1Q14444 709 aaKnown RBP15.51■□□□□ 0.07
COL7A1-208ENST00000470076 EMBQ6PCB8 327 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 EIF3MQ7L2H7 374 aaKnown RBP15.51■□□□□ 0.07
COL7A1-208ENST00000470076 BHLHA15Q7RTS1 189 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-208ENST00000470076 C16orf62Q7Z3J2 963 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 OR8J2Q8NGG1 315 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 LILRB1Q8NHL6 650 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-208ENST00000470076 PIWIL2Q8TC59 973 aaKnown RBP15.51■□□□□ 0.07
COL7A1-208ENST00000470076 MIPOL1Q8TD10 442 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF350Q9GZX5 532 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 KCNE5Q9UJ90 142 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 MKLN1Q9UL63 735 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 DNHD1Q96M86 4753 aa15.51■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF724A8MTY0 619 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 OVOL3O00110 214 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 SMAD9O15198 467 aaKnown RBP15.5■□□□□ 0.07
COL7A1-208ENST00000470076 H6PDO95479 791 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 GUSBP08236 651 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 SESN3P58005 492 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 ETFDHQ16134 617 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 PDCD2Q16342 344 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-208ENST00000470076 HEPHL1Q6MZM0 1159 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 SSX8Q7RTT4 187 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 CLEC4FQ8N1N0 589 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF619Q8N2I2 560 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 OR4A15Q8NGL6 344 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 AENQ8WTP8 325 aaKnown RBP15.5■□□□□ 0.07
COL7A1-208ENST00000470076 SLC25A43Q8WUT9 341 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-208ENST00000470076 TRMT61AQ96FX7 289 aaKnown RBP15.5■□□□□ 0.07
COL7A1-208ENST00000470076 TMEM109Q9BVC6 243 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 QRSL1Q9H0R6 528 aaKnown RBP15.5■□□□□ 0.07
COL7A1-208ENST00000470076 OR51I1Q9H343 314 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 AKTIPQ9H8T0 292 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 POLE3Q9NRF9 147 aa15.5■□□□□ 0.07
COL7A1-208ENST00000470076 CENPVL1A0A0U1RR11 272 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 ITM2AO43736 263 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 SNUPNO95149 360 aaKnown RBP15.49■□□□□ 0.07
COL7A1-208ENST00000470076 SERPINE1P05121 402 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 FESP07332 822 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 DANCRP0C864 163 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 MYZAPP0CAP1 466 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 UBTFL6P0CB48 400 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-208ENST00000470076 DIO1P49895 249 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 CSNK2A1P68400 391 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-208ENST00000470076 BSPH1Q075Z2 132 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 MERTKQ12866 999 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF672Q499Z4 452 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-208ENST00000470076 SYT14P1Q58G82 188 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 ATAD3BQ5T9A4 648 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 SEZ6L2Q6UXD5 910 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 DNAJC14Q6Y2X3 702 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-208ENST00000470076 TMPPEQ6ZT21 453 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 GALNT5Q7Z7M9 940 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF781Q8N8C0 355 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 VPS37AQ8NEZ2 397 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 SMAP2Q8WU79 429 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-208ENST00000470076 PKNOX2Q96KN3 472 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 DPY30Q9C005 99 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 ACER3Q9NUN7 267 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 PRSS50Q9UI38 385 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 SLC35A3Q9Y2D2 325 aa15.49■□□□□ 0.07
COL7A1-208ENST00000470076 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-208ENST00000470076 SPIN1Q9Y657 262 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-208ENST00000470076 PRSS51A0A1B0GVH4 220 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 INAFM1C9JVW0 142 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 SULT2B1O00204 365 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 BIRC5O15392 142 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 KIAA0513O60268 411 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 SCN2BO60939 215 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 LYZL6O75951 148 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 SOD3P08294 240 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 UQCRC2P22695 453 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 APOBEC1P41238 236 aaKnown RBP15.48■□□□□ 0.07
COL7A1-208ENST00000470076 ABCE1P61221 599 aaKnown RBP15.48■□□□□ 0.07
COL7A1-208ENST00000470076 TNK1Q13470 666 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 CHI3L2Q15782 390 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 ANXA8L1Q5VT79 327 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 AP1ARQ63HQ0 302 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 P2RY8Q86VZ1 359 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF100Q8IYN0 542 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 KIRREL3Q8IZU9 778 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 FAM71CQ8NEG0 241 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 XAGE5Q8WWM1 108 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms