RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 BCAS1O75363 584 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-208ENST00000469802 CSTAP01040 98 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 OR12D1P0DN82 309 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 HOXB4P17483 251 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-208ENST00000469802 ENPP1P22413 925 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 PGM1P36871 562 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 KHKP50053 298 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 CASP9P55211 416 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 WDR4P57081 412 aaKnown RBP14.5□□□□□ -0.09
COL9A3-208ENST00000469802 PLAURQ03405 335 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 FAM174BQ3ZCQ3 159 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 TIGD2Q4W5G0 525 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 Q5PR19 223 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 TNFAIP8L2Q6P589 184 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-208ENST00000469802 FRRS1Q6ZNA5 592 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 CROCCP2Q86T23 111 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 SLC43A2Q8N370 569 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 VPS37AQ8NEZ2 397 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 RAB8BQ92930 207 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 TEX37Q96LM6 180 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 CCL19Q99731 98 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 PSD2Q9BQI7 771 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 TACO1Q9BSH4 297 aaKnown RBP14.5□□□□□ -0.09
COL9A3-208ENST00000469802 THUMPD3Q9BV44 507 aaKnown RBP14.5□□□□□ -0.09
COL9A3-208ENST00000469802 QRSL1Q9H0R6 528 aaKnown RBP14.5□□□□□ -0.09
COL9A3-208ENST00000469802 AIG1Q9NVV5 245 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 BTNL2Q9UIR0 455 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 WDR45Q9Y484 360 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 A0A1W2PNR3 127 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 SMAD9O15198 467 aaKnown RBP14.49□□□□□ -0.09
COL9A3-208ENST00000469802 SMPD2O60906 423 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 SNNO75324 88 aaPredicted RBP14.49□□□□□ -0.09
COL9A3-208ENST00000469802 PRKD3O94806 890 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 CPSF4O95639 269 aaKnown RBP14.49□□□□□ -0.09
COL9A3-208ENST00000469802 C1QCP02747 245 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 YES1P07947 543 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 UBTFL6P0CB48 400 aaPredicted RBP14.49□□□□□ -0.09
COL9A3-208ENST00000469802 SLC7A1P30825 629 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 NR1H2P55055 460 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 SESN3P58005 492 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 ATAD3BQ5T9A4 648 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 ZNF704Q6ZNC4 412 aaPredicted RBP14.49□□□□□ -0.09
COL9A3-208ENST00000469802 EIF3MQ7L2H7 374 aaKnown RBP14.49□□□□□ -0.09
COL9A3-208ENST00000469802 BIVMQ86UB2 503 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 ATP6V1C2Q8NEY4 427 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 S100PBPQ96BU1 408 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 ROPN1LQ96C74 230 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 C18orf12Q96KH6 178 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 SLC35A5Q9BS91 424 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 KCNK9Q9NPC2 374 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 ACER3Q9NUN7 267 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 KLHL9Q9P2J3 617 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 SLC35A3Q9Y2D2 325 aa14.49□□□□□ -0.09
COL9A3-208ENST00000469802 IGHV3-15A0A0B4J1V0 119 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 HMGN4O00479 90 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 ARHGEF9O43307 516 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 CYTIPO60759 359 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 PGCP20142 388 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 IL12AP29459 219 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 S100A3P33764 101 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 UFM1P61960 85 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 PRSS57Q6UWY2 283 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 SEZ6L2Q6UXD5 910 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 PLEKHM3Q6ZWE6 761 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 WFDC8Q8IUA0 241 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 ZNF619Q8N2I2 560 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 STEAP2Q8NFT2 490 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 XAGE5Q8WWM1 108 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 TMEM234Q8WY98 164 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 ZBTB9Q96C00 473 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 PLPPR2Q96GM1 343 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 OR5B2Q96R09 309 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 CCDC106Q9BWC9 280 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 EXOSC3Q9NQT5 275 aaKnown RBP14.48□□□□□ -0.09
COL9A3-208ENST00000469802 MARCOQ9UEW3 520 aaPredicted RBP14.48□□□□□ -0.09
COL9A3-208ENST00000469802 GPR45Q9Y5Y3 372 aa14.48□□□□□ -0.09
COL9A3-208ENST00000469802 TMEM120BA0PK00 339 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ZNF814B7Z6K7 855 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ADAM11O75078 769 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 CYP7B1O75881 506 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 PLAUP00749 431 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 PGRP06401 933 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 INHBBP09529 407 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 PAX1P15863 534 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 OR3A2P47893 321 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 DIO1P49895 249 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 SLC18A1P54219 525 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 MERTKQ12866 999 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 P2RY6Q15077 328 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 SYT14P1Q58G82 188 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 SFRP5Q5T4F7 317 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ABLIM2Q6H8Q1 611 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 SPATA19Q7Z5L4 167 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ANKRD42Q8N9B4 389 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 SLC25A43Q8WUT9 341 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ZNF75CPQ92670 426 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ARL8AQ96BM9 186 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ZG16BQ96DA0 208 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 COX4I2Q96KJ9 171 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 SMR3AQ99954 134 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms