RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 TNFAIP8L2Q6P589 184 aaPredicted RBP16.08■□□□□ 0.16
MRPL28-208ENST00000469744 FAM111BQ6SJ93 734 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 KCTD8Q6ZWB6 473 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 SLC22A16Q86VW1 577 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 TMEM251Q8N6I4 163 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 BBS10Q8TAM1 723 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 TMIGD2Q96BF3 282 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 NMD3Q96D46 503 aaKnown RBP16.08■□□□□ 0.16
MRPL28-208ENST00000469744 SPATA5L1Q9BVQ7 753 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 ENOPH1Q9UHY7 261 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 POFUT2Q9Y2G5 429 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 HRH3Q9Y5N1 445 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 GMPPBQ9Y5P6 360 aa16.08■□□□□ 0.16
MRPL28-208ENST00000469744 C2orf92A0A1B0GVN3 265 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 PRAMEF25A6NGN4 478 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 OR6C76A6NM76 312 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 SLC1A7O00341 560 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 EMC8O43402 210 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 GLSO94925 669 aaPredicted RBP16.07■□□□□ 0.16
MRPL28-208ENST00000469744 BCHEP06276 602 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 CELA3AP09093 270 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 FBXO45P0C2W1 286 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 MATN1P21941 496 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 SPIBQ01892 262 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 FUT7Q11130 342 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 NPRL3Q12980 569 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 LTB4RQ15722 352 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 SLC22A10Q63ZE4 541 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 SP5Q6BEB4 398 aaPredicted RBP16.07■□□□□ 0.16
MRPL28-208ENST00000469744 LAIR2Q6ISS4 152 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 GALNT5Q7Z7M9 940 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 ZNF615Q8N8J6 731 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 ZNF441Q8N8Z8 693 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 SIMC1Q8NDZ2 872 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 OR10G2Q8NGC3 310 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 FAM57AQ8TBR7 257 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 ZNF681Q96N22 645 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 OR10A5Q9H207 317 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 SERHL2Q9H4I8 314 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 ZDHHC11Q9H8X9 412 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 SH2D2AQ9NP31 389 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 PLSCR2Q9NRY7 297 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 ZCCHC3Q9NUD5 404 aaKnown RBP16.07■□□□□ 0.16
MRPL28-208ENST00000469744 TNFRSF10DQ9UBN6 386 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 DTX4Q9Y2E6 619 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 TPRKBQ9Y3C4 175 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 TESMINQ9Y4I5 508 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 PCDHGB1Q9Y5G3 927 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 GPC6Q9Y625 555 aaPredicted RBP16.07■□□□□ 0.16
MRPL28-208ENST00000469744 ZNF780BQ9Y6R6 833 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 PKDREJQ9NTG1 2253 aa16.07■□□□□ 0.16
MRPL28-208ENST00000469744 FREM3P0C091 2139 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 IL7RP16871 459 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 EEF1B2P24534 225 aaKnown RBP16.06■□□□□ 0.16
MRPL28-208ENST00000469744 POLR2IP36954 125 aaKnown RBP16.06■□□□□ 0.16
MRPL28-208ENST00000469744 PEX19P40855 299 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 KCNJ5P48544 419 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 PRR5P85299 388 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 IL5RAQ01344 420 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 TEKQ02763 1124 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 TP53BP2Q13625 1128 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 EXOSC7Q15024 291 aaKnown RBP16.06■□□□□ 0.16
MRPL28-208ENST00000469744 NNATQ16517 81 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 HLA-DQA1Q5Y7H0 255 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 ARHGAP11AQ6P4F7 1023 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 KRT73Q86Y46 540 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 ERI1Q8IV48 349 aaKnown RBP16.06■□□□□ 0.16
MRPL28-208ENST00000469744 PRR22Q8IZ63 422 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 VWA5B2Q8N398 1253 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 SLC15A4Q8N697 577 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 PAQR8Q8TEZ7 354 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 PROX1Q92786 737 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 CNRIP1Q96F85 164 aaPredicted RBP16.06■□□□□ 0.16
MRPL28-208ENST00000469744 HRASLS5Q96KN8 279 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 DOK1Q99704 481 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 OR51I1Q9H343 314 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 C3orf14Q9HBI5 128 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 PROK2Q9HC23 129 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 ACER3Q9NUN7 267 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 NTMQ9P121 344 aa16.06■□□□□ 0.16
MRPL28-208ENST00000469744 CHCHD2Q9Y6H1 151 aaPredicted RBP16.06■□□□□ 0.16
MRPL28-208ENST00000469744 NPIPA2E9PIF3 369 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 NPIPA3F8WFD2 350 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 IFI6P09912 130 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 ETS2P15036 469 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 S1PR1P21453 382 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 DCKP27707 260 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 YAP1P46937 504 aaKnown RBP16.05■□□□□ 0.16
MRPL28-208ENST00000469744 SMSP52788 366 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 FBXW4P57775 412 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 SMIM11AP58511 58 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 RPS26P62854 115 aaKnown RBP16.05■□□□□ 0.16
MRPL28-208ENST00000469744 MGAT2Q10469 447 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 PMS2P3Q13401 168 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 DYNC1I2Q13409 638 aaKnown RBP16.05■□□□□ 0.16
MRPL28-208ENST00000469744 RAB39AQ14964 217 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 LAPTM4AQ15012 233 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 DUSP7Q16829 419 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 PRICKLE4Q2TBC4 344 aa16.05■□□□□ 0.16
MRPL28-208ENST00000469744 XKRXQ6PP77 449 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms