RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 FCRLBQ6BAA4 426 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 ISLR2Q6UXK2 745 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 HS3ST5Q8IZT8 346 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 GALNT4Q8N4A0 578 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 SIRT6Q8N6T7 355 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 FADS6Q8N9I5 356 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 OR52J3Q8NH60 311 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 MAGEE2Q8TD90 523 aaPredicted RBP11.62□□□□□ -0.55
TRAF4-208ENST00000469529 TMEM234Q8WY98 164 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 ST8SIA1Q92185 356 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 AGAP4Q96P64 663 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 METTL7AQ9H8H3 244 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 SMURF2Q9HAU4 748 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 RHCGQ9UBD6 479 aa11.62□□□□□ -0.55
TRAF4-208ENST00000469529 MRPS18CQ9Y3D5 142 aaKnown RBP11.62□□□□□ -0.55
TRAF4-208ENST00000469529 A0A087WZY1 265 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 SLC16A6O15403 523 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 KLF4O43474 513 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 TRIM3O75382 744 aaPredicted RBP11.61□□□□□ -0.55
TRAF4-208ENST00000469529 NTN1O95631 604 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 GASTP01350 101 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 GSTM3P21266 225 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 CNR1P21554 472 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 FKBP2P26885 142 aaKnown RBP11.61□□□□□ -0.55
TRAF4-208ENST00000469529 ADH6P28332 368 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 CD96P40200 585 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 IDH2P48735 452 aaKnown RBP11.61□□□□□ -0.55
TRAF4-208ENST00000469529 AQP4P55087 323 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 ADARB1P78563 741 aaKnown RBP11.61□□□□□ -0.55
TRAF4-208ENST00000469529 ALDH6A1Q02252 535 aaKnown RBP11.61□□□□□ -0.55
TRAF4-208ENST00000469529 PRKCDQ05655 676 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 MFAP5Q13361 173 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 GLYR1Q49A26 553 aaPredicted RBP11.61□□□□□ -0.55
TRAF4-208ENST00000469529 ALG10BQ5I7T1 473 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 TMPRSS11FQ6ZWK6 438 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 ZER1Q7Z7L7 766 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 ATG4DQ86TL0 474 aaPredicted RBP11.61□□□□□ -0.55
TRAF4-208ENST00000469529 NKAIN4Q8IVV8 208 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 BEST3Q8N1M1 668 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 WDSUB1Q8N9V3 476 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 OR4K5Q8NGD3 323 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 LIPHQ8WWY8 451 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 C3orf49Q96BT1 292 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 CRELD1Q96HD1 420 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 TMEM43Q9BTV4 400 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 ZNF552Q9H707 407 aaPredicted RBP11.61□□□□□ -0.55
TRAF4-208ENST00000469529 TIMMDC1Q9NPL8 285 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 SACM1LQ9NTJ5 587 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 KLRF1Q9NZS2 232 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 RPS6KB2Q9UBS0 482 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 SLC7A7Q9UM01 511 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 NTNG1Q9Y2I2 539 aa11.61□□□□□ -0.55
TRAF4-208ENST00000469529 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 ARGFXA6NJG6 315 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 SNPHO15079 494 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 KLK10O43240 276 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 SCO2O43819 266 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 CBR3O75828 277 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 NEURL1O76050 574 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 P04436 131 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 CCL3P10147 92 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 CDH2P19022 906 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-208ENST00000469529 MST1P26927 711 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 RYKP34925 604 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 CASRP41180 1078 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 OMPP47874 163 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 GSSP48637 474 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 ESRRGP62508 458 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 MERTKQ12866 999 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 TUBA3CQ13748 450 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 NDUFAF6Q330K2 333 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 SLC36A3Q495N2 470 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 TTC23Q5W5X9 447 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 TIGD3Q6B0B8 471 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 PGBD2Q6P3X8 592 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 TUBA3EQ6PEY2 450 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 C5orf46Q6UWT4 87 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 USP51Q70EK9 711 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 RRM2BQ7LG56 351 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 GRINAQ7Z429 371 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 PLCZ1Q86YW0 608 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 SPACA3Q8IXA5 215 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 CYP4Z2PQ8N1L4 340 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 ATG16L2Q8NAA4 619 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 GATSQ8NAP1 163 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 OR2M3Q8NG83 312 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 OR5M3Q8NGP4 307 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 OR6S1Q8NH40 331 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 TMEM239Q8WW34 195 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 MRGPRX4Q96LA9 322 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 UTP23Q9BRU9 249 aaKnown RBP11.6□□□□□ -0.55
TRAF4-208ENST00000469529 GABARAPL3Q9BY60 117 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 PTGES2Q9H7Z7 377 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 ZNF556Q9HAH1 456 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 KRCC1Q9NPI7 259 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-208ENST00000469529 SELENONQ9NZV5 590 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 PPP4R1LQ9P1A2 415 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 TMEM5Q9Y2B1 443 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 POFUT2Q9Y2G5 429 aa11.6□□□□□ -0.55
TRAF4-208ENST00000469529 C15orf41Q9Y2V0 281 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms