RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RIT2Q99578 217 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 PAK1IP1Q9NWT1 392 aaPredicted RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 SAMD4AQ9UPU9 718 aaKnown RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 WDR45Q9Y484 360 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 OARD1Q9Y530 152 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 DIP2CQ9Y2E4 1556 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 FMN1Q68DA7 1419 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 KDRP35968 1356 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 ATRXP46100 2492 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.79□□□□□ -1.8
LSM5-209ENST00000468872 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.79□□□□□ -1.8
LSM5-209ENST00000468872 H3BMQ9 156 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 K7ENP7 123 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 FCN1O00602 326 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 MAGEB3O15480 346 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 SRSF10O75494 262 aaKnown RBP3.79□□□□□ -1.8
LSM5-209ENST00000468872 HNF1AP20823 631 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 PRPHP41219 470 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 STARP49675 285 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 CSTF1Q05048 431 aaKnown RBP3.79□□□□□ -1.8
LSM5-209ENST00000468872 RIPPLY1Q0D2K3 151 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 NDUFA9Q16795 377 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 CFAP157Q5JU67 520 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 SLC25A30Q5SVS4 291 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 MARC1Q5VT66 337 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 FAM71F2Q6NXP2 309 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 FAHD2BQ6P2I3 314 aaPredicted RBP3.79□□□□□ -1.8
LSM5-209ENST00000468872 OR5L2Q8NGL0 311 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 FAHD2AQ96GK7 314 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 VSIG2Q96IQ7 327 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 OMDQ99983 421 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 PPDPFQ9H3Y8 114 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 WRAP73Q9P2S5 460 aaPredicted RBP3.79□□□□□ -1.8
LSM5-209ENST00000468872 SPRR3Q9UBC9 169 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 RNF14Q9UBS8 474 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 Q9UF83 564 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 ZNF221Q9UK13 617 aa3.79□□□□□ -1.8
LSM5-209ENST00000468872 MRPS7Q9Y2R9 242 aaKnown RBP3.79□□□□□ -1.8
LSM5-209ENST00000468872 PRDM15P57071 1507 aaPredicted RBP3.79□□□□□ -1.8
LSM5-209ENST00000468872 TET3O43151 1660 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 FRMPD4Q14CM0 1322 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 KIF16BQ96L93 1317 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 ADGRB2O60241 1585 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 REREQ9P2R6 1566 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 GPR89AB7ZAQ6 455 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 BTN3A3O00478 584 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 GPX5O75715 221 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 GPR89BP0CG08 455 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 SPIBQ01892 262 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 CD47Q08722 323 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 RAB40BQ12829 278 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 GSG1Q2KHT4 349 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 UTF1Q5T230 341 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 WSCD1Q658N2 575 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 BAIAP2L2Q6UXY1 529 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 ACOT1Q86TX2 421 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 GPR137CQ8N3F9 429 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 CLDN19Q8N6F1 224 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 C15orf54Q8N8G6 183 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 ANKFN1Q8N957 763 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 MRAPQ8TCY5 172 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 AENQ8WTP8 325 aaKnown RBP3.78□□□□□ -1.8
LSM5-209ENST00000468872 SLC5A11Q8WWX8 675 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 NOL4LQ96MY1 436 aaPredicted RBP3.78□□□□□ -1.8
LSM5-209ENST00000468872 AMDHD1Q96NU7 426 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 OR5B2Q96R09 309 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 CITED1Q99966 193 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 GLIPR2Q9H4G4 154 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 GORASP2Q9H8Y8 452 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 CAB39LQ9H9S4 337 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 RAB18Q9NP72 206 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 SMPD3Q9NY59 655 aaPredicted RBP3.78□□□□□ -1.8
LSM5-209ENST00000468872 ABCD2Q9UBJ2 740 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 TBK1Q9UHD2 729 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 RIMS3Q9UJD0 308 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 MAB21L2Q9Y586 359 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 PTCH1Q13635 1447 aa3.78□□□□□ -1.8
LSM5-209ENST00000468872 KDM5AP29375 1690 aaKnown RBP3.78□□□□□ -1.81
LSM5-209ENST00000468872 RALGAPA1Q6GYQ0 2036 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 ABCC3O15438 1527 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 LOC100131303A0A0U1RQF7 123 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 A0A1W2PNV4 684 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 OR7A17O14581 309 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 PHOX2AO14813 284 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 MSH4O15457 936 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 SERPINA2P20848 420 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 GLRA2P23416 452 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 GBX2P52951 348 aaPredicted RBP3.77□□□□□ -1.81
LSM5-209ENST00000468872 UBE2HP62256 183 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 RPL32P62910 135 aaKnown RBP3.77□□□□□ -1.81
LSM5-209ENST00000468872 OTUD4Q01804 1114 aaKnown RBP3.77□□□□□ -1.81
LSM5-209ENST00000468872 MXD4Q14582 209 aaPredicted RBP3.77□□□□□ -1.81
LSM5-209ENST00000468872 C10orf120Q5SQS8 335 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 ATF7IP2Q5U623 682 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 FAM199XQ6PEV8 388 aaPredicted RBP3.77□□□□□ -1.81
LSM5-209ENST00000468872 VITQ6UXI7 678 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 ZNF683Q8IZ20 524 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 SLC38A6Q8IZM9 456 aa3.77□□□□□ -1.81
LSM5-209ENST00000468872 CD177Q8N6Q3 437 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms