RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 MID1IP1Q9NPA3 183 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 KCNE3Q9Y6H6 103 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 IGKV3D-15A0A087WSY6 115 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 LRP5LA4QPB2 252 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 CCDC151A5D8V7 595 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 POC1B-GALNT4F8VUJ3 575 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 ETV2O00321 342 aaPredicted RBP16.34■□□□□ 0.21
LINC00888-201ENST00000468380 ITGA5P08648 1049 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 ZNF23P17027 643 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 ATP5F1P24539 256 aaPredicted RBP16.34■□□□□ 0.21
LINC00888-201ENST00000468380 QPRTQ15274 297 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 CARTPTQ16568 116 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 IMPG1Q17R60 797 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 IQCCQ4KMZ1 466 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 ZCCHC12Q6PEW1 402 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 RFWD2Q8NHY2 731 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 FBXO17Q96EF6 278 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 TNFRSF12AQ9NP84 129 aa16.34■□□□□ 0.21
LINC00888-201ENST00000468380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC00888-201ENST00000468380 LOC390937A0A1W2PQ73 354 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 ZNF716A6NP11 495 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 NPIPB9F8W1W9 429 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 GTPBP1O00178 669 aaKnown RBP16.33■□□□□ 0.2
LINC00888-201ENST00000468380 AKAP10O43572 662 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 DIO1P49895 249 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 PHC1P78364 1004 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 SLC25A3Q00325 362 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 FAM174BQ3ZCQ3 159 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 TIGD2Q4W5G0 525 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 TMPPEQ6ZT21 453 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 ANKS4BQ8N8V4 417 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 JADE3Q92613 823 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 APH1AQ96BI3 265 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 FAM120BQ96EK7 910 aaKnown RBP16.33■□□□□ 0.2
LINC00888-201ENST00000468380 BPESC1Q9GZL8 116 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 SIRT3Q9NTG7 399 aaPredicted RBP16.33■□□□□ 0.2
LINC00888-201ENST00000468380 ASB6Q9NWX5 421 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 TAS2R16Q9NYV7 291 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 SH3BP4Q9P0V3 963 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 ZNF180Q9UJW8 692 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 STK38LQ9Y2H1 464 aa16.33■□□□□ 0.2
LINC00888-201ENST00000468380 ATP6V1G2-DDX39BF2Z307 99 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 PDLIM1O00151 329 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 SEC22BO75396 215 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 RSL1D1O76021 490 aaKnown RBP16.32■□□□□ 0.2
LINC00888-201ENST00000468380 VENTXO95231 258 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 HSPA4LO95757 839 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 HMGN2P05204 90 aaKnown RBP16.32■□□□□ 0.2
LINC00888-201ENST00000468380 IL2RGP31785 369 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 PDK3Q15120 406 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 ABLIM2Q6H8Q1 611 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 CDC73Q6P1J9 531 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 MTDHQ86UE4 582 aaKnown RBP16.32■□□□□ 0.2
LINC00888-201ENST00000468380 RELL1Q8IUW5 271 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 OR52E4Q8NGH9 312 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 OR5W2Q8NH69 310 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 ZFP28Q8NHY6 868 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 ZNF764Q96H86 408 aaPredicted RBP16.32■□□□□ 0.2
LINC00888-201ENST00000468380 STACQ99469 402 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 TRMOQ9BU70 441 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 HOXD1Q9GZZ0 328 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 CDC42EP4Q9H3Q1 356 aaKnown RBP16.32■□□□□ 0.2
LINC00888-201ENST00000468380 PIGUQ9H490 435 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 REEP4Q9H6H4 257 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 FKRPQ9H9S5 495 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 DUSP22Q9NRW4 184 aa16.32■□□□□ 0.2
LINC00888-201ENST00000468380 ACSS1Q9NUB1 689 aaPredicted RBP16.32■□□□□ 0.2
LINC00888-201ENST00000468380 TMEFF2Q9UIK5 374 aaPredicted RBP16.32■□□□□ 0.2
LINC00888-201ENST00000468380 NOSIPQ9Y314 301 aaKnown RBP16.32■□□□□ 0.2
LINC00888-201ENST00000468380 TBX19O60806 448 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 ATP12AP54707 1039 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 LASP1Q14847 261 aaKnown RBP16.31■□□□□ 0.2
LINC00888-201ENST00000468380 ZSWIM7Q19AV6 140 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 C9orf135Q5VTT2 229 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 OR7E24Q6IFN5 339 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 LSRQ86X29 649 aaPredicted RBP16.31■□□□□ 0.2
LINC00888-201ENST00000468380 ZNF527Q8NB42 609 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 PPCDCQ96CD2 204 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 CHMP6Q96FZ7 201 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 MALT1Q9UDY8 824 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 BAIAP2L1Q9UHR4 511 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 MOKQ9UQ07 419 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 DTNAQ9Y4J8 743 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 PTGDR2Q9Y5Y4 395 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 FKBP7Q9Y680 259 aa16.31■□□□□ 0.2
LINC00888-201ENST00000468380 H3BNH8 94 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 SULT2B1O00204 365 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 DNAJA2O60884 412 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 SLU7O95391 586 aaKnown RBP16.3■□□□□ 0.2
LINC00888-201ENST00000468380 SNRPAP09012 282 aaKnown RBP16.3■□□□□ 0.2
LINC00888-201ENST00000468380 ATP6V1C1P21283 382 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 SRP14P37108 136 aaKnown RBP16.3■□□□□ 0.2
LINC00888-201ENST00000468380 SESN3P58005 492 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 PDE7AQ13946 482 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 C3orf33Q6P1S2 294 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 SLC22A9Q8IVM8 553 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 CCNYL1Q8N7R7 359 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 CLHC1Q8NHS4 586 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 DNAJA3Q96EY1 480 aa16.3■□□□□ 0.2
LINC00888-201ENST00000468380 TSSK3Q96PN8 268 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms