RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MED25Q71SY5 747 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SLCO4A1Q96BD0 722 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 FOXQ1Q9C009 403 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 ATG5Q9H1Y0 275 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 POLE4Q9NR33 117 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 EIF3KQ9UBQ5 218 aaKnown RBP12.82□□□□□ -0.36
BRAT1-203ENST00000467558 C5orf51A6NDU8 294 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 DISC1C4P0D8 188 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 LGI1O95970 557 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 PIGAP37287 484 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 CTBP2P56545 445 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 PAPD4Q6PIY7 484 aaKnown RBP12.82□□□□□ -0.36
BRAT1-203ENST00000467558 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 MISPQ8IVT2 679 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 CMIPQ8IY22 773 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF100Q8IYN0 542 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 FBXL6Q8N531 539 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 GPR148Q8TDV2 347 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 TRPV4Q9HBA0 871 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 PLEKHA6Q9Y2H5 1048 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 RPH3AQ9Y2J0 694 aaPredicted RBP12.82□□□□□ -0.36
BRAT1-203ENST00000467558 A0A1B0GX78 115 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 A6NCN8 305 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 VSTM5A8MXK1 200 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 RLN2P04090 185 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 MAS1P04201 325 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 GSTT2P0CG29 244 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 VAMP1P23763 118 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 FPR3P25089 353 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SLC5A2P31639 672 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 CA5AP35218 305 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 ART1P52961 327 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 PRAMEF17Q5VTA0 474 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SLC6A19Q695T7 634 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SYT13Q7L8C5 426 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 ENTHD1Q8IYW4 607 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 OR13C3Q8NGS6 347 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 PLA2G2FQ9BZM2 168 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 PISDQ9UG56 409 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SERGEFQ9UGK8 458 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 TBC1D24Q9ULP9 559 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SLC7A11Q9UPY5 501 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 MED16Q9Y2X0 877 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 DCNP07585 359 aaKnown RBP12.82□□□□□ -0.36
BRAT1-203ENST00000467558 ICAM2P13598 275 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 MAOAP21397 527 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 PRKXP51817 358 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 OR5M10Q6IEU7 315 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 CCDC36Q8IYA8 594 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 NLGN4XQ8N0W4 816 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 OR4F15Q8NGB8 312 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SLC7A13Q8TCU3 470 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 CLCC1Q96S66 551 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 ULBP3Q9BZM4 244 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 MED11Q9P086 117 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF69Q9UC07 566 aa12.82□□□□□ -0.36
BRAT1-203ENST00000467558 SPTY2D1-AS1A0A0U1RR47 76 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ATE1O95260 518 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 NSA2O95478 260 aaKnown RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 NID1P14543 1247 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 S100A1P23297 94 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 IDUAP35475 653 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 BCL2L15Q5TBC7 163 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 C5orf46Q6UWT4 87 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 RNF165Q6ZSG1 346 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 OLIG3Q7RTU3 272 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 GDF7Q7Z4P5 450 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ELP5Q8TE02 316 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 CREB3L1Q96BA8 519 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 POTEKPQ9BYX7 375 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 RABL2AQ9UBK7 228 aaPredicted RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 RABL2BQ9UNT1 228 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 FCER2P06734 321 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ARHGDIBP52566 201 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ARPC4P59998 168 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 SLX4IPQ5VYV7 408 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF704Q6ZNC4 412 aaPredicted RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 OR13F1Q8NGS4 319 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 DUSP19Q8WTR2 217 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 SIGLEC6O43699 453 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 TACR3P29371 465 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 EEF1A2Q05639 463 aaKnown RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 HTR4Q13639 388 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ELAVL1Q15717 326 aaKnown RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF322Q6U7Q0 402 aaPredicted RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ZSCAN1Q8NBB4 408 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 TP53I13Q8NBR0 393 aaPredicted RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 SDF2Q99470 211 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 RBM24Q9BX46 236 aaKnown RBP12.81□□□□□ -0.36
BRAT1-203ENST00000467558 ACER3Q9NUN7 267 aa12.81□□□□□ -0.36
BRAT1-203ENST00000467558 TRAV6A0A075B6T7 132 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 TCRBV5S2A0A599 114 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF749O43361 778 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 SLC16A7O60669 478 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 GRK5P34947 590 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 CAPZBP47756 277 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 SWI5Q1ZZU3 235 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 ACSM3Q53FZ2 586 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms