RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 UBL4AP11441 157 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 DCKP27707 260 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 MSX1P28360 303 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 KCNJ5P48544 419 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 MASP1P48740 699 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 ARHGDIAP52565 204 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 CRYBA2P53672 197 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 TPD52P55327 224 aaPredicted RBP13.46□□□□□ -0.26
DDX56-208ENST00000467318 GABARAPL2P60520 117 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 SELENOWP63302 87 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 EEF1A1P68104 462 aaKnown RBP13.46□□□□□ -0.26
DDX56-208ENST00000467318 DUSP7Q16829 419 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 MRPL2Q5T653 305 aaKnown RBP13.46□□□□□ -0.26
DDX56-208ENST00000467318 TBPL2Q6SJ96 375 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 CBLL1Q75N03 491 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 SULF2Q8IWU5 870 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 SMYD1Q8NB12 490 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 OR2M7Q8NG81 312 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 ISOC1Q96CN7 298 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 DOK1Q99704 481 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 HES7Q9BYE0 225 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 RTN4RQ9BZR6 473 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 DEPPQ9NTK1 212 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 KLHL28Q9NXS3 571 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 PPP4R1LQ9P1A2 415 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 BOKQ9UMX3 212 aaPredicted RBP13.46□□□□□ -0.26
DDX56-208ENST00000467318 NINQ8N4C6 2090 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 IGLV3-32A0A0A0MS00 114 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 SYT5O00445 386 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 SUV39H1O43463 412 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 PRKD3O94806 890 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 SERPINA1P01009 418 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 OPN1SWP03999 348 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 DNASE1L1P49184 302 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 GPR85P60893 370 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 CD226Q15762 336 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 TIGD3Q6B0B8 471 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 RPUSD3Q6P087 351 aaKnown RBP13.45□□□□□ -0.26
DDX56-208ENST00000467318 ZNF836Q6ZNA1 936 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 KCTD8Q6ZWB6 473 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 HMGN2P46Q86SG4 172 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 PLCZ1Q86YW0 608 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 ZNF440Q8IYI8 595 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 FAM71CQ8NEG0 241 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 OR1J4Q8NGS1 313 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 PNPLA2Q96AD5 504 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 MUS81Q96NY9 551 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 EXOSC3Q9NQT5 275 aaKnown RBP13.45□□□□□ -0.26
DDX56-208ENST00000467318 FAM118AQ9NWS6 357 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 ETAA1Q9NY74 926 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 CACNA1BQ00975 2339 aa13.45□□□□□ -0.26
DDX56-208ENST00000467318 EML6Q6ZMW3 1958 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 CLDN24A6NM45 220 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 G3V3Y1 287 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 SNPHO15079 494 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 HCRTR2O43614 444 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 LGI1O95970 557 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 TMBIM6P55061 237 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 INAQ16352 499 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 ENPP6Q6UWR7 440 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 OFCC1Q8IZS5 231 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 CLIP4Q8N3C7 705 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 WDSUB1Q8N9V3 476 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 GATSQ8NAP1 163 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 ZFP62Q8NB50 900 aaPredicted RBP13.44□□□□□ -0.26
DDX56-208ENST00000467318 TOR1AIP2Q8NFQ8 470 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 PROX1Q92786 737 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 LAT2Q9GZY6 243 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 PTGES2Q9H7Z7 377 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 PLGRKTQ9HBL7 147 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 ZFP64Q9NPA5 681 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 RLIMQ9NVW2 624 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 CHST2Q9Y4C5 530 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 C2orf72A6NCS6 295 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 CBR3O75828 277 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 MT-ND1P03886 318 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 CD247P20963 164 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 EEF1B2P24534 225 aaKnown RBP13.44□□□□□ -0.26
DDX56-208ENST00000467318 PCSK6P29122 969 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 MEOX1P50221 254 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 P2RX1P51575 399 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 SUMO3P55854 103 aaPredicted RBP13.44□□□□□ -0.26
DDX56-208ENST00000467318 PPP2R2BQ00005 443 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 FOXO1Q12778 655 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 PMS2P3Q13401 168 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 ZIK1Q3SY52 487 aaPredicted RBP13.44□□□□□ -0.26
DDX56-208ENST00000467318 SLC6A19Q695T7 634 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 ZNF550Q7Z398 422 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 TEX19Q8NA77 164 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 SETD9Q8NE22 299 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 B4GALNT2Q8NHY0 566 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 C12orf43Q96C57 262 aaKnown RBP13.44□□□□□ -0.26
DDX56-208ENST00000467318 JSRP1Q96MG2 331 aaPredicted RBP13.44□□□□□ -0.26
DDX56-208ENST00000467318 RSPO3Q9BXY4 272 aaPredicted RBP13.44□□□□□ -0.26
DDX56-208ENST00000467318 MFRPQ9BY79 579 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 TOR3AQ9H497 397 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 SLC9A8Q9Y2E8 581 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 CARD8Q9Y2G2 431 aa13.44□□□□□ -0.26
DDX56-208ENST00000467318 A0A0G2JMM0 328 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms