RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 RIMS3Q9UJD0 308 aa2.33□□□□□ -2.04
ATG3-204ENST00000467275 U3KQV3 271 aa2.33□□□□□ -2.04
ATG3-204ENST00000467275 ABCC4O15439 1325 aa2.33□□□□□ -2.04
ATG3-204ENST00000467275 A0A0U1RQS6 177 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 A0A0U1RQV5 110 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 H3BTX0 84 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 CHADO15335 359 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 HCN1O60741 890 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 COX7A1P24310 79 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 PDZK1IP1Q13113 114 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 ADPRMQ3LIE5 342 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 UNQ9370/PRO34162Q6UXP9 181 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 ARMCX2Q7L311 632 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 GET4Q7L5D6 327 aaPredicted RBP2.32□□□□□ -2.04
ATG3-204ENST00000467275 MISPQ8IVT2 679 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 ZNF695Q8IW36 515 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 CHCHD10Q8WYQ3 142 aaPredicted RBP2.32□□□□□ -2.04
ATG3-204ENST00000467275 ZNF578Q96N58 590 aaPredicted RBP2.32□□□□□ -2.04
ATG3-204ENST00000467275 OR2M2Q96R28 347 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 POLE3Q9NRF9 147 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 YAE1D1Q9NRH1 226 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 PAK1IP1Q9NWT1 392 aaPredicted RBP2.32□□□□□ -2.04
ATG3-204ENST00000467275 ATXN10Q9UBB4 475 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 MGAT4BQ9UQ53 548 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 AURKCQ9UQB9 309 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 ATP8B3O60423 1300 aa2.32□□□□□ -2.04
ATG3-204ENST00000467275 SCN2AQ99250 2005 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 ANKRD30BLA7E2S9 258 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 H0YL77 283 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 CLDN3O15551 220 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 VPS26AO75436 327 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 ANXA4P09525 319 aaPredicted RBP2.31□□□□□ -2.04
ATG3-204ENST00000467275 RRASP10301 218 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 EPHX2P34913 555 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 HTR5AP47898 357 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 TFPI2P48307 235 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 SCGB2A2Q13296 93 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 PVRIGQ6DKI7 326 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 SLC39A4Q6P5W5 647 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 ZNF836Q6ZNA1 936 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 ARCQ7LC44 396 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 VRK2Q86Y07 508 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 KRTAP13-1Q8IUC0 172 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 ZNF615Q8N8J6 731 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 CCDC110Q8TBZ0 833 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 SELENOMQ8WWX9 145 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 ADIPOR1Q96A54 375 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 PINX1Q96BK5 328 aaKnown RBP2.31□□□□□ -2.04
ATG3-204ENST00000467275 RPUSD4Q96CM3 377 aaKnown RBP2.31□□□□□ -2.04
ATG3-204ENST00000467275 TBC1D31Q96DN5 1066 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 ELMO2Q96JJ3 720 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 RASL11BQ9BPW5 248 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 ZNF670Q9BS34 389 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 RNF126Q9BV68 326 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 MRPL13Q9BYD1 178 aaKnown RBP2.31□□□□□ -2.04
ATG3-204ENST00000467275 SRXN1Q9BYN0 137 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 LIN28AQ9H9Z2 209 aaKnown RBP2.31□□□□□ -2.04
ATG3-204ENST00000467275 TRPV5Q9NQA5 729 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 GDAP2Q9NXN4 497 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 RBAKQ9NYW8 714 aaPredicted RBP2.31□□□□□ -2.04
ATG3-204ENST00000467275 C6orf203Q9P0P8 240 aaPredicted RBP2.31□□□□□ -2.04
ATG3-204ENST00000467275 EPS15L1Q9UBC2 864 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 MTRF1LQ9UGC7 380 aaKnown RBP2.31□□□□□ -2.04
ATG3-204ENST00000467275 TTC21BQ7Z4L5 1316 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 CUX2O14529 1486 aa2.31□□□□□ -2.04
ATG3-204ENST00000467275 A0A087WZY1 265 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 A0A1B0GUL7 405 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 LRRC30A6NM36 301 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 K7EPI3 171 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 SPAG7O75391 227 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 SCGB2A1O75556 95 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 DIRAS3O95661 229 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 CA3P07451 260 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 GCFC2P16383 781 aaKnown RBP2.3□□□□□ -2.04
ATG3-204ENST00000467275 DPP4P27487 766 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 ADRA1AP35348 466 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 NOVA1P51513 510 aaKnown RBP2.3□□□□□ -2.04
ATG3-204ENST00000467275 MNAT1P51948 309 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 SH3BGRP55822 239 aaPredicted RBP2.3□□□□□ -2.04
ATG3-204ENST00000467275 NIPAL3Q6P499 406 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 TMEM184AQ6ZMB5 413 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 ACP7Q6ZNF0 438 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 TTC5Q8N0Z6 440 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 TMEM158Q8WZ71 300 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 STARD8Q92502 1023 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 VSTM2LQ96N03 204 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 TESK2Q96S53 571 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 FICDQ9BVA6 458 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 TBC1D10AQ9BXI6 508 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 NFKBIZQ9BYH8 718 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 RPAP3Q9H6T3 665 aaPredicted RBP2.3□□□□□ -2.04
ATG3-204ENST00000467275 GPN2Q9H9Y4 310 aaPredicted RBP2.3□□□□□ -2.04
ATG3-204ENST00000467275 EML4Q9HC35 981 aaKnown RBP2.3□□□□□ -2.04
ATG3-204ENST00000467275 B9D1Q9UPM9 204 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 PLLPQ9Y342 182 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 NEUROG3Q9Y4Z2 214 aa2.3□□□□□ -2.04
ATG3-204ENST00000467275 DHX57Q6P158 1386 aaKnown RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 LOC100131303A0A0U1RQF7 123 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 WASH3PC4AMC7 463 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 AK1P00568 194 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms