RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ARMC1Q9NVT9 282 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 QPCTLQ9NXS2 382 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 TAS2R10Q9NYW0 307 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 PRDM4Q9UKN5 801 aa10.11□□□□□ -0.79
VCP-204ENST00000466100 MRPS18CQ9Y3D5 142 aaKnown RBP10.11□□□□□ -0.79
VCP-204ENST00000466100 A0A087WZY1 265 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 A0A0B4J2E0 115 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 A0A1B0GWA3 101 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 A0A1B0GX12 115 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 FAM166BA8MTA8 275 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 CDC40O60508 579 aaKnown RBP eCLIP10.1□□□□□ -0.79
VCP-204ENST00000466100 DIRAS1O95057 198 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 OR5F1O95221 314 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 FABP3P05413 133 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 HPNP05981 417 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 CELA3AP09093 270 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 RHCEP18577 417 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 DPP4P27487 766 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 SLC1A3P43003 542 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 IDH2P48735 452 aaKnown RBP10.1□□□□□ -0.79
VCP-204ENST00000466100 SESN3P58005 492 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 PPIAP62937 165 aaKnown RBP10.1□□□□□ -0.79
VCP-204ENST00000466100 FOXF1Q12946 379 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 LY6DQ14210 128 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 OR1Q1Q15612 314 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 WBP2NLQ6ICG8 309 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 ZNF613Q6PF04 617 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 LSRQ86X29 649 aaPredicted RBP10.1□□□□□ -0.79
VCP-204ENST00000466100 OFCC1Q8IZS5 231 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 GTPBP8Q8N3Z3 284 aaPredicted RBP10.1□□□□□ -0.79
VCP-204ENST00000466100 FAM98AQ8NCA5 519 aaKnown RBP10.1□□□□□ -0.79
VCP-204ENST00000466100 FAM83FQ8NEG4 500 aaPredicted RBP10.1□□□□□ -0.79
VCP-204ENST00000466100 ADAMTS16Q8TE57 1224 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 PYDC1Q8WXC3 89 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 CHID1Q9BWS9 393 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 ADAM19Q9H013 955 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 PTGES2Q9H7Z7 377 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 ACER3Q9NUN7 267 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 LUZP4Q9P127 313 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 B4GALT7Q9UBV7 327 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 AURKCQ9UQB9 309 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 VDAC3Q9Y277 283 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 NBASA2RRP1 2371 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 ZGRF1Q86YA3 2104 aa10.1□□□□□ -0.79
VCP-204ENST00000466100 TRAPPC13A5PLN9 417 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 CPSF4LA6NMK7 179 aaKnown RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 SHISA8B8ZZ34 492 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 RASAL1O95294 804 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 NUDT14O95848 222 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 SFTPCP11686 197 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 UQCRBP14927 111 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 ZNF17P17021 662 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 ITGA2P17301 1181 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 GDF1P27539 372 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 MAGEA5P43359 124 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 YAP1P46937 504 aaKnown RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 ZNF41P51814 821 aaPredicted RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 CDH12P55289 794 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 PLGLB1Q02325 96 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 KLRB1Q12918 225 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 PIN1Q13526 163 aaPredicted RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 GLYR1Q49A26 553 aaPredicted RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 CMPK2Q5EBM0 449 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 SWT1Q5T5J6 900 aaKnown RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 ZNF324BQ6AW86 544 aaPredicted RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 ZFP1Q6P2D0 407 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 WDR88Q6ZMY6 472 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 PLEKHM3Q6ZWE6 761 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 GDF7Q7Z4P5 450 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 ATG4DQ86TL0 474 aaPredicted RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 SLC22A16Q86VW1 577 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 FAM109AQ8N4B1 249 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 PIK3C3Q8NEB9 887 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 ZBTB8AQ96BR9 441 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 MRGPRX4Q96LA9 322 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 UBL7Q96S82 380 aaPredicted RBP10.09□□□□□ -0.79
VCP-204ENST00000466100 PIP5K1AQ99755 562 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 PRSS27Q9BQR3 290 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 FUZQ9BT04 418 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 ZNF426Q9BUY5 554 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 C12orf10Q9HB07 376 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 CTPS2Q9NRF8 586 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 VNN3Q9NY84 501 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 RIMS3Q9UJD0 308 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 OSGIN1Q9UJX0 560 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 DKKL1Q9UK85 242 aa10.09□□□□□ -0.79
VCP-204ENST00000466100 OR2M5A3KFT3 312 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 ACOT7O00154 380 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 CHP2O43745 196 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 EFNA2O43921 213 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 TIPRLO75663 272 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 KRT36O76013 467 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 WISP2O76076 250 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 IGHG3P01860 377 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 THRBP10828 461 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 GP1BBP13224 206 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 ZNF24P17028 368 aa10.08□□□□□ -0.8
VCP-204ENST00000466100 HK1P19367 917 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms