RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 C7orf34Q96L11 122 aa2.92□□□□□ -1.94
LRCH3-211ENST00000466054 RIT2Q99578 217 aa2.92□□□□□ -1.94
LRCH3-211ENST00000466054 SLC35A5Q9BS91 424 aa2.92□□□□□ -1.94
LRCH3-211ENST00000466054 RNF126Q9BV68 326 aa2.92□□□□□ -1.94
LRCH3-211ENST00000466054 TMEM117Q9H0C3 514 aa2.92□□□□□ -1.94
LRCH3-211ENST00000466054 GLIPR2Q9H4G4 154 aa2.92□□□□□ -1.94
LRCH3-211ENST00000466054 WARS2Q9UGM6 360 aaKnown RBP2.92□□□□□ -1.94
LRCH3-211ENST00000466054 UBQLN1Q9UMX0 589 aaKnown RBP2.92□□□□□ -1.94
LRCH3-211ENST00000466054 SCML2Q9UQR0 700 aa2.92□□□□□ -1.94
LRCH3-211ENST00000466054 AP1M2Q9Y6Q5 423 aa2.92□□□□□ -1.94
LRCH3-211ENST00000466054 COL16A1Q07092 1604 aaPredicted RBP2.92□□□□□ -1.94
LRCH3-211ENST00000466054 TDRD6O60522 2096 aaKnown RBP2.91□□□□□ -1.94
LRCH3-211ENST00000466054 K7N7A8 449 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 SLITRK3O94933 977 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 GNA14O95837 355 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 DRD5P21918 477 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 AQP1P29972 269 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 YWHABP31946 246 aaKnown RBP2.91□□□□□ -1.94
LRCH3-211ENST00000466054 HPDP32754 393 aaPredicted RBP2.91□□□□□ -1.94
LRCH3-211ENST00000466054 HPCAL1P37235 193 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 GNB2P62879 340 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 CCDC173Q0VFZ6 552 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 SELPLGQ14242 412 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 IL17AQ16552 155 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 SYPL1Q16563 259 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 ATF7IP2Q5U623 682 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 KIAA1328Q86T90 577 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 ACOT1Q86TX2 421 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 LRRC43Q8N309 656 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 TMEM252Q8N6L7 170 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 TEX9Q8N6V9 391 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 SYT14Q8NB59 555 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 OR51G2Q8NGK0 314 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 C7orf33Q8WU49 177 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 OR1E3Q8WZA6 343 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 FAM3CQ92520 227 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 SYAP1Q96A49 352 aaPredicted RBP2.91□□□□□ -1.94
LRCH3-211ENST00000466054 DTNBP1Q96EV8 351 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 SH3YL1Q96HL8 342 aaPredicted RBP2.91□□□□□ -1.94
LRCH3-211ENST00000466054 PLEKHF1Q96S99 279 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 TUBGCP2Q9BSJ2 902 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 ALG12Q9BV10 488 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 MEAF6Q9HAF1 191 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 SH2D2AQ9NP31 389 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 LCMT1Q9UIC8 334 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 RASD1Q9Y272 281 aa2.91□□□□□ -1.94
LRCH3-211ENST00000466054 G3V4G9 280 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 ZNF264O43296 627 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 PRKYO43930 277 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 CA1P00915 261 aaPredicted RBP2.9□□□□□ -1.95
LRCH3-211ENST00000466054 TSPY4P0CV99 314 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 TSPY10P0CW01 314 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 HSPA5P11021 654 aaKnown RBP2.9□□□□□ -1.95
LRCH3-211ENST00000466054 MGMTP16455 207 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 OTX2P32243 289 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 CA8P35219 290 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 SOX6P35712 828 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 CHI3L1P36222 383 aaPredicted RBP2.9□□□□□ -1.95
LRCH3-211ENST00000466054 PRKXP51817 358 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 HSD17B7P56937 341 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 RIPK4P57078 832 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 TIMM10P62072 90 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 CNTN2Q02246 1040 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 ELP6Q0PNE2 266 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 MXD4Q14582 209 aaPredicted RBP2.9□□□□□ -1.95
LRCH3-211ENST00000466054 USH1GQ495M9 461 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 CCDC137Q6PK04 289 aaKnown RBP2.9□□□□□ -1.95
LRCH3-211ENST00000466054 UNQ9370/PRO34162Q6UXP9 181 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 Q6ZVH6 145 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 MOB3BQ86TA1 216 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 ZDHHC21Q8IVQ6 265 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 KIR3DL3Q8N743 410 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 LINC01555Q8NAE3 123 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 STXBP6Q8NFX7 210 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 OR5L2Q8NGL0 311 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 RPL3LQ92901 407 aaKnown RBP2.9□□□□□ -1.95
LRCH3-211ENST00000466054 ELSPBP1Q96BH3 223 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 SLC35E1Q96K37 410 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 LINC00167Q96N53 147 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 EBF4Q9BQW3 602 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 NIPSNAP3BQ9BS92 247 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 NXF5Q9H1B4 397 aaKnown RBP2.9□□□□□ -1.95
LRCH3-211ENST00000466054 OR51J1Q9H342 316 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 APMAPQ9HDC9 416 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 TMOD2Q9NZR1 351 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 RPS6KB2Q9UBS0 482 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 NAP1L2Q9ULW6 460 aaPredicted RBP2.9□□□□□ -1.95
LRCH3-211ENST00000466054 IFT52Q9Y366 437 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 KIF16BQ96L93 1317 aa2.9□□□□□ -1.95
LRCH3-211ENST00000466054 KDRP35968 1356 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 WI2-2373I1.2A0A1W2PRP0 233 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 MBLAC1A4D2B0 266 aaPredicted RBP2.89□□□□□ -1.95
LRCH3-211ENST00000466054 TRIM49D1C9J1S8 452 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 BTN3A3O00478 584 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 NDC80O14777 642 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 TM7SF2O76062 418 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 LRATO95237 230 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 SNAPINO95295 136 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 HPNP05981 417 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 FUT3P21217 361 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms