RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 AGTR1P30556 359 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 KCNJ5P48544 419 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 MVDP53602 400 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 CTBP2P56545 445 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 SESN3P58005 492 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 SELENBP1Q13228 472 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 MAPK11Q15759 364 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 EXOC3L2Q2M3D2 409 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 GTDC1Q4AE62 458 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 TIGD2Q4W5G0 525 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 EPGNQ6UW88 154 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 EIF3MQ7L2H7 374 aaKnown RBP19.44■□□□□ 0.7
LIME1-203ENST00000465591 ZFP90Q8TF47 636 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 NINJ1Q92982 152 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 ATP6V1G3Q96LB4 118 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 SLC39A3Q9BRY0 314 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 SLC38A1Q9H2H9 487 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 ZIM2Q9NZV7 527 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 C6orf203Q9P0P8 240 aaPredicted RBP19.44■□□□□ 0.7
LIME1-203ENST00000465591 NDRG3Q9UGV2 375 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 MTORP42345 2549 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 DEFB108AA8MXU0 73 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 C16orf97H3BN30 126 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 UBDO15205 165 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 GSTA3Q16772 222 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 ANKRD34AQ69YU3 496 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 PAMR1Q6UXH9 720 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 TRIML2Q8N7C3 387 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 C7orf26Q96N11 449 aa19.43■□□□□ 0.7
LIME1-203ENST00000465591 IGHV3-15A0A0B4J1V0 119 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 RFXANKO14593 260 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 IL6P05231 212 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 ENPP1P22413 925 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 PLEKHM3Q6ZWE6 761 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 NUFIP2Q7Z417 695 aaKnown RBP19.42■□□□□ 0.7
LIME1-203ENST00000465591 ST8SIA1Q92185 356 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 CNOT9Q92600 299 aaKnown RBP19.42■□□□□ 0.7
LIME1-203ENST00000465591 CPNE4Q96A23 557 aaPredicted RBP19.42■□□□□ 0.7
LIME1-203ENST00000465591 VPS33AQ96AX1 596 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 TRNT1Q96Q11 434 aaKnown RBP19.42■□□□□ 0.7
LIME1-203ENST00000465591 KLHL4Q9C0H6 718 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 C12orf49Q9H741 205 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 GLRX2Q9NS18 164 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 ACER3Q9NUN7 267 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 SLC35A3Q9Y2D2 325 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 ACANP16112 2415 aa19.42■□□□□ 0.7
LIME1-203ENST00000465591 GJE1A6NN92 205 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 CASKO14936 926 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 GOSR1O95249 250 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 PGCP20142 388 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 RYKP34925 604 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 KCNJ10P78508 379 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 HPCAP84074 193 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 LRRC74AQ0VAA2 488 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 MERTKQ12866 999 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 STAC2Q6ZMT1 411 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 FCRLAQ7L513 359 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 TUSC5Q8IXB3 177 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 OIT3Q8WWZ8 545 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 AURKBQ96GD4 344 aaPredicted RBP19.41■□□□□ 0.7
LIME1-203ENST00000465591 ZC3HAV1LQ96H79 300 aaKnown RBP19.41■□□□□ 0.7
LIME1-203ENST00000465591 FOXC2Q99958 501 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 EBF4Q9BQW3 602 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 MED18Q9BUE0 208 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 CXXC4Q9H2H0 198 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 TIGARQ9NQ88 270 aa19.41■□□□□ 0.7
LIME1-203ENST00000465591 ING1Q9UK53 422 aaPredicted RBP19.41■□□□□ 0.7
LIME1-203ENST00000465591 ZNF469Q96JG9 3925 aaPredicted RBP19.4■□□□□ 0.7
LIME1-203ENST00000465591 AGAP5A6NIR3 686 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 ATE1O95260 518 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 THBDP07204 575 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 CRYGSP22914 178 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 SLC7A1P30825 629 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 POLR2JP52435 117 aaKnown RBP19.4■□□□□ 0.7
LIME1-203ENST00000465591 C3orf33Q6P1S2 294 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 LRRC74BQ6ZQY2 392 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 LRRC8CQ8TDW0 803 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 OR5B2Q96R09 309 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 CCDC106Q9BWC9 280 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.4■□□□□ 0.7
LIME1-203ENST00000465591 KLHL13Q9P2N7 655 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 LIPT1Q9Y234 373 aa19.4■□□□□ 0.7
LIME1-203ENST00000465591 AP3D1O14617 1153 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 ZCCHC18P0CG32 403 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 ETFAP13804 333 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 CD1EP15812 388 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 RPS4Y1P22090 263 aaKnown RBP19.39■□□□□ 0.69
LIME1-203ENST00000465591 DNASE1P24855 282 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 LOXP28300 417 aaPredicted RBP19.39■□□□□ 0.69
LIME1-203ENST00000465591 IDH3AP50213 366 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 RAC3P60763 192 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 MIER2Q8N344 545 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 TMEM234Q8WY98 164 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 REXO5Q96IC2 774 aaKnown RBP19.39■□□□□ 0.69
LIME1-203ENST00000465591 EXOSC3Q9NQT5 275 aaKnown RBP19.39■□□□□ 0.69
LIME1-203ENST00000465591 CTPS2Q9NRF8 586 aa19.39■□□□□ 0.69
LIME1-203ENST00000465591 SMAD9O15198 467 aaKnown RBP19.38■□□□□ 0.69
LIME1-203ENST00000465591 KRT75O95678 551 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 RAF1P04049 648 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 PABPC4LP0CB38 370 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms