RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ADAP00813 363 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 YES1P07947 543 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 NPIPA8P0DM63 369 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 KRT4P19013 534 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 ATP6V1C1P21283 382 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 IL32P24001 234 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 ELK4P28324 431 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 ADH6P28332 368 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 ASMTP46597 345 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 P2RX1P51575 399 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 LASP1Q14847 261 aaKnown RBP8.6□□□□□ -1.03
USP39-212ENST00000465514 MLC1Q15049 377 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 TAB1Q15750 504 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 TOMM34Q15785 309 aaPredicted RBP8.6□□□□□ -1.03
USP39-212ENST00000465514 KLHL26Q53HC5 615 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 SFRP5Q5T4F7 317 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 CBLN3Q6UW01 205 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 DNAJC14Q6Y2X3 702 aaPredicted RBP8.6□□□□□ -1.03
USP39-212ENST00000465514 FCRLAQ7L513 359 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 MTERF4Q7Z6M4 381 aaKnown RBP8.6□□□□□ -1.03
USP39-212ENST00000465514 DDIASQ8IXT1 998 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 GSPT2Q8IYD1 628 aaKnown RBP8.6□□□□□ -1.03
USP39-212ENST00000465514 ZNF527Q8NB42 609 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 OR7A2PQ8NGA2 310 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 GPR119Q8TDV5 335 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 ZFAND2BQ8WV99 257 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 HSD17B8Q92506 261 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 GCDHQ92947 438 aaPredicted RBP8.6□□□□□ -1.03
USP39-212ENST00000465514 STACQ99469 402 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 GATA5Q9BWX5 397 aaPredicted RBP8.6□□□□□ -1.03
USP39-212ENST00000465514 CACNG6Q9BXT2 260 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 TRIM2Q9C040 744 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 HOXD1Q9GZZ0 328 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 PIGUQ9H490 435 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 ZNF696Q9H7X3 374 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 NGBQ9NPG2 151 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 DUSP22Q9NRW4 184 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 KLHL13Q9P2N7 655 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 ATP6V1HQ9UI12 483 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 ICAM5Q9UMF0 924 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 DNAJC15Q9Y5T4 150 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 SNX8Q9Y5X2 465 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 KCNE3Q9Y6H6 103 aa8.6□□□□□ -1.03
USP39-212ENST00000465514 HEATR1Q9H583 2144 aaKnown RBP8.6□□□□□ -1.03
USP39-212ENST00000465514 IGHV3-15A0A0B4J1V0 119 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 TMEM89A2RUT3 159 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 GJE1A6NN92 205 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 TMEM233B4DJY2 109 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 ZNF814B7Z6K7 855 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 H3BNH8 94 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 GTPBP1O00178 669 aaKnown RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 PIP5K1BO14986 540 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 SCAMP2O15127 329 aaKnown RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 TMPRSS2O15393 492 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 TRIM13O60858 407 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 FGF4P08620 206 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 LAMP1P11279 417 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 PRKCAP17252 672 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 DDX5P17844 614 aaKnown RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 ENPP1P22413 925 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 SRP14P37108 136 aaKnown RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 HPCAL1P37235 193 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 CCT3P49368 545 aaKnown RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 SUMO3P55854 103 aaPredicted RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 BSPH1Q075Z2 132 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 GGTLC2Q14390 218 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 PCLAFQ15004 111 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 P2RY6Q15077 328 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 NDUFAF6Q330K2 333 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 UGT3A2Q3SY77 523 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 DCST2Q5T1A1 773 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP39-212ENST00000465514 CDC73Q6P1J9 531 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 TDRPQ86YL5 185 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 C4orf33Q8N1A6 199 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 RFWD2Q8NHY2 731 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 PIWIL2Q8TC59 973 aaKnown RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 ADAMTS15Q8TE58 950 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 ZFP90Q8TF47 636 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 TWIST2Q8WVJ9 160 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 PROX1Q92786 737 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 KISS1RQ969F8 398 aaPredicted RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 ZNF524Q96C55 264 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 TRMOQ9BU70 441 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 ACTRT3Q9BYD9 372 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 COQ10BQ9H8M1 238 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 ANKZF1Q9H8Y5 726 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 GP6Q9HCN6 339 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 FAIMQ9NVQ4 179 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 CISD1Q9NZ45 108 aaKnown RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 ARMCX1Q9P291 453 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 GIMAP2Q9UG22 337 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 TRAF6Q9Y4K3 522 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 ACTL7BQ9Y614 415 aa8.59□□□□□ -1.03
USP39-212ENST00000465514 GPC6Q9Y625 555 aaPredicted RBP8.59□□□□□ -1.03
USP39-212ENST00000465514 RYR3Q15413 4870 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 ARFGEF3Q5TH69 2177 aa8.58□□□□□ -1.04
USP39-212ENST00000465514 A0A1W2PNR3 127 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms