RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 FFAR1O14842 300 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 MPZL2O60487 215 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 MITFO75030 526 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 OR5F1O95221 314 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 TFAP2AP05549 437 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 CT62P0C5K7 136 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 NID1P14543 1247 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 ATP6V1B1P15313 513 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 GSTM3P21266 225 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 S1PR1P21453 382 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 SH3BGRP55822 239 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 RGS8P57771 180 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 TAS2R41P59536 307 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 ISL1P61371 349 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 MAT1AQ00266 395 aaKnown RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 IL5RAQ01344 420 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 CD47Q08722 323 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 ST3GAL3Q11203 375 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 COX10Q12887 443 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 GANABQ14697 944 aaKnown RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 EXOSC7Q15024 291 aaKnown RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 TRAM2Q15035 370 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 CYP27C1Q4G0S4 372 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 C6orf141Q5SZD1 244 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF770Q6IQ21 691 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 MTFR2Q6P444 385 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF773Q6PK81 442 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 CD300LDQ6UXZ3 194 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 MEX3BQ6ZN04 569 aaKnown RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 SIRT6Q8N6T7 355 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 AQP11Q8NBQ7 271 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 OR6T1Q8NGN1 323 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 BRIX1Q8TDN6 353 aaKnown RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 SLC38A4Q969I6 547 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 ANKRA2Q9H9E1 313 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 CCNB1IP1Q9NPC3 277 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 KRCC1Q9NPI7 259 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-215ENST00000465457 LANCL2Q9NS86 450 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 TPRKBQ9Y3C4 175 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 JMJD1CQ15652 2540 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
HDAC6-215ENST00000465457 IGKV3D-11A0A0A0MRZ8 115 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 SH3PXD2BA1X283 911 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 FCMRO60667 390 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 IFNA16P05015 189 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 CYC1P08574 325 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 ALAS2P22557 587 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 CRHBPP24387 322 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 LCN1P31025 176 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 GABRA3P34903 492 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 GGT2P36268 569 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 CLK3P49761 638 aaKnown RBP12.65□□□□□ -0.38
HDAC6-215ENST00000465457 EMDP50402 254 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 EEF1A1P68104 462 aaKnown RBP12.65□□□□□ -0.38
HDAC6-215ENST00000465457 RPP38P78345 283 aaKnown RBP12.65□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF267Q14586 743 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-215ENST00000465457 ELAVL1Q15717 326 aaKnown RBP12.65□□□□□ -0.38
HDAC6-215ENST00000465457 INAQ16352 499 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 VRK2Q86Y07 508 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 CMIPQ8IY22 773 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 VSTM2LQ96N03 204 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 PTCHD1Q96NR3 888 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 LMF1Q96S06 567 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 SPOCK3Q9BQ16 436 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 FUZQ9BT04 418 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 UCK2Q9BZX2 261 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 TGIF2Q9GZN2 237 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 ENKD1Q9H0I2 346 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 TSPAN10Q9H1Z9 355 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-215ENST00000465457 SCN3BQ9NY72 215 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 ABI3Q9P2A4 366 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 TESQ9UGI8 421 aaKnown RBP12.65□□□□□ -0.38
HDAC6-215ENST00000465457 MKLN1Q9UL63 735 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 CLDN16Q9Y5I7 305 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 SCN3AQ9NY46 2000 aa12.65□□□□□ -0.38
HDAC6-215ENST00000465457 HRNRQ86YZ3 2850 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-215ENST00000465457 RTTNQ86VV8 2226 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 TRBV4-1A0A0J9YWV2 114 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 TGFBR3LH3BV60 316 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 OR10H3O60404 316 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 NME6O75414 186 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-215ENST00000465457 CDC123O75794 336 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-215ENST00000465457 KCNK2O95069 426 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 ANGPTL1O95841 491 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 EPPINO95925 133 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 LINGO3P0C6S8 592 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 CYP4B1P13584 511 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 TNNI3P19429 210 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 AGAP20933 346 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 MAOAP21397 527 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 EEF1B2P24534 225 aaKnown RBP12.64□□□□□ -0.39
HDAC6-215ENST00000465457 OR1D4P47884 311 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 ALDH3B2P48448 385 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 CDC42P60953 191 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 DCAF7P61962 342 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 BTG2P78543 158 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 ALDH6A1Q02252 535 aaKnown RBP12.64□□□□□ -0.39
HDAC6-215ENST00000465457 SYT16Q17RD7 645 aa12.64□□□□□ -0.39
HDAC6-215ENST00000465457 ANKRD34AQ69YU3 496 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms