RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TMEM176BQ3YBM2 270 aaPredicted RBP8.12□□□□□ -1.11
APP-213ENST00000464867 ZNF628Q5EBL2 1059 aa8.12□□□□□ -1.11
APP-213ENST00000464867 ZNF362Q5T0B9 420 aaPredicted RBP8.12□□□□□ -1.11
APP-213ENST00000464867 LCE1DQ5T752 114 aa8.12□□□□□ -1.11
APP-213ENST00000464867 TEDDM1Q5T9Z0 273 aa8.12□□□□□ -1.11
APP-213ENST00000464867 LIPJQ5W064 366 aa8.12□□□□□ -1.11
APP-213ENST00000464867 RAD9BQ6WBX8 426 aa8.12□□□□□ -1.11
APP-213ENST00000464867 DOK3Q7L591 496 aa8.12□□□□□ -1.11
APP-213ENST00000464867 VSTM4Q8IW00 320 aa8.12□□□□□ -1.11
APP-213ENST00000464867 C17orf78Q8N4C9 275 aa8.12□□□□□ -1.11
APP-213ENST00000464867 PDPRQ8NCN5 879 aa8.12□□□□□ -1.11
APP-213ENST00000464867 MRAPQ8TCY5 172 aa8.12□□□□□ -1.11
APP-213ENST00000464867 ANKRD49Q8WVL7 239 aa8.12□□□□□ -1.11
APP-213ENST00000464867 LRRC58Q96CX6 371 aa8.12□□□□□ -1.11
APP-213ENST00000464867 CERS2Q96G23 380 aa8.12□□□□□ -1.11
APP-213ENST00000464867 NAT9Q9BTE0 207 aa8.12□□□□□ -1.11
APP-213ENST00000464867 FAIM2Q9BWQ8 316 aa8.12□□□□□ -1.11
APP-213ENST00000464867 RSPO3Q9BXY4 272 aaPredicted RBP8.12□□□□□ -1.11
APP-213ENST00000464867 DERL2Q9GZP9 239 aa8.12□□□□□ -1.11
APP-213ENST00000464867 ANKZF1Q9H8Y5 726 aa8.12□□□□□ -1.11
APP-213ENST00000464867 ANKRA2Q9H9E1 313 aa8.12□□□□□ -1.11
APP-213ENST00000464867 C3orf14Q9HBI5 128 aa8.12□□□□□ -1.11
APP-213ENST00000464867 Q9N2J8 555 aa8.12□□□□□ -1.11
APP-213ENST00000464867 G6PC2Q9NQR9 355 aa8.12□□□□□ -1.11
APP-213ENST00000464867 MED17Q9NVC6 651 aa8.12□□□□□ -1.11
APP-213ENST00000464867 ZDHHC2Q9UIJ5 367 aa8.12□□□□□ -1.11
APP-213ENST00000464867 ADAM29Q9UKF5 820 aa8.12□□□□□ -1.11
APP-213ENST00000464867 CES1P1Q9UKY3 287 aa8.12□□□□□ -1.11
APP-213ENST00000464867 SH3PXD2BA1X283 911 aa8.11□□□□□ -1.11
APP-213ENST00000464867 LYNX1G3V0Z9 82 aa8.11□□□□□ -1.11
APP-213ENST00000464867 H0YIV9 168 aa8.11□□□□□ -1.11
APP-213ENST00000464867 hCG_2039718K7EN88 272 aa8.11□□□□□ -1.11
APP-213ENST00000464867 K7EPI3 171 aa8.11□□□□□ -1.11
APP-213ENST00000464867 COQ9O75208 318 aa8.11□□□□□ -1.11
APP-213ENST00000464867 NME6O75414 186 aaPredicted RBP8.11□□□□□ -1.11
APP-213ENST00000464867 UTS2O95399 124 aa8.11□□□□□ -1.11
APP-213ENST00000464867 LTA4HP09960 611 aaKnown RBP8.11□□□□□ -1.11
APP-213ENST00000464867 LYNX1P0DP58 116 aa8.11□□□□□ -1.11
APP-213ENST00000464867 OMGP23515 440 aa8.11□□□□□ -1.11
APP-213ENST00000464867 VAMP1P23763 118 aa8.11□□□□□ -1.11
APP-213ENST00000464867 GATA3P23771 443 aa8.11□□□□□ -1.11
APP-213ENST00000464867 ELK4P28324 431 aa8.11□□□□□ -1.11
APP-213ENST00000464867 LOXL3P58215 753 aa8.11□□□□□ -1.11
APP-213ENST00000464867 RAC3P60763 192 aa8.11□□□□□ -1.11
APP-213ENST00000464867 FAM189A2Q15884 450 aa8.11□□□□□ -1.11
APP-213ENST00000464867 GALNT18Q6P9A2 607 aa8.11□□□□□ -1.11
APP-213ENST00000464867 SYT10Q6XYQ8 523 aa8.11□□□□□ -1.11
APP-213ENST00000464867 SPATC1Q76KD6 591 aa8.11□□□□□ -1.11
APP-213ENST00000464867 MRPL41Q8IXM3 137 aaKnown RBP8.11□□□□□ -1.11
APP-213ENST00000464867 SAMD14Q8IZD0 417 aaPredicted RBP8.11□□□□□ -1.11
APP-213ENST00000464867 ZCCHC24Q8N2G6 241 aaKnown RBP8.11□□□□□ -1.11
APP-213ENST00000464867 ATP6V1C2Q8NEY4 427 aa8.11□□□□□ -1.11
APP-213ENST00000464867 OR4F5Q8NH21 305 aa8.11□□□□□ -1.11
APP-213ENST00000464867 TRPC4APQ8TEL6 797 aa8.11□□□□□ -1.11
APP-213ENST00000464867 ZFP90Q8TF47 636 aa8.11□□□□□ -1.11
APP-213ENST00000464867 MAIP1Q8WWC4 291 aa8.11□□□□□ -1.11
APP-213ENST00000464867 EXT2Q93063 718 aa8.11□□□□□ -1.11
APP-213ENST00000464867 ANKRD27Q96NW4 1050 aa8.11□□□□□ -1.11
APP-213ENST00000464867 ZNF300Q96RE9 604 aaPredicted RBP8.11□□□□□ -1.11
APP-213ENST00000464867 BBS4Q96RK4 519 aa8.11□□□□□ -1.11
APP-213ENST00000464867 CITED1Q99966 193 aa8.11□□□□□ -1.11
APP-213ENST00000464867 KRTAP17-1Q9BYP8 105 aa8.11□□□□□ -1.11
APP-213ENST00000464867 TRIM5Q9C035 493 aa8.11□□□□□ -1.11
APP-213ENST00000464867 POPDC3Q9HBV1 291 aa8.11□□□□□ -1.11
APP-213ENST00000464867 SLC17A5Q9NRA2 495 aa8.11□□□□□ -1.11
APP-213ENST00000464867 GIMAP4Q9NUV9 329 aa8.11□□□□□ -1.11
APP-213ENST00000464867 UTS2RQ9UKP6 389 aa8.11□□□□□ -1.11
APP-213ENST00000464867 NOSIPQ9Y314 301 aaKnown RBP8.11□□□□□ -1.11
APP-213ENST00000464867 SLC22A31A6NKX4 558 aa8.1□□□□□ -1.11
APP-213ENST00000464867 CLDN34H7C241 214 aa8.1□□□□□ -1.11
APP-213ENST00000464867 KIF2AO00139 706 aaPredicted RBP8.1□□□□□ -1.11
APP-213ENST00000464867 PPIHO43447 177 aaKnown RBP8.1□□□□□ -1.11
APP-213ENST00000464867 CYTIPO60759 359 aa8.1□□□□□ -1.11
APP-213ENST00000464867 SHOX2O60902 331 aaPredicted RBP8.1□□□□□ -1.11
APP-213ENST00000464867 KCNH1O95259 989 aa8.1□□□□□ -1.11
APP-213ENST00000464867 ESRRBO95718 433 aa8.1□□□□□ -1.11
APP-213ENST00000464867 KRT14P02533 472 aa8.1□□□□□ -1.11
APP-213ENST00000464867 CRYBA1P05813 215 aa8.1□□□□□ -1.11
APP-213ENST00000464867 HPGDP15428 266 aa8.1□□□□□ -1.11
APP-213ENST00000464867 NPR2P20594 1047 aa8.1□□□□□ -1.11
APP-213ENST00000464867 EDNRAP25101 427 aa8.1□□□□□ -1.11
APP-213ENST00000464867 SHC1P29353 583 aa8.1□□□□□ -1.11
APP-213ENST00000464867 MAGEA3P43357 314 aa8.1□□□□□ -1.11
APP-213ENST00000464867 TMEM33P57088 247 aa8.1□□□□□ -1.11
APP-213ENST00000464867 TAS2R39P59534 338 aa8.1□□□□□ -1.11
APP-213ENST00000464867 ATP6V0D1P61421 351 aa8.1□□□□□ -1.11
APP-213ENST00000464867 PSG6Q00889 435 aa8.1□□□□□ -1.11
APP-213ENST00000464867 SLC18A2Q05940 514 aa8.1□□□□□ -1.11
APP-213ENST00000464867 MLANAQ16655 118 aa8.1□□□□□ -1.11
APP-213ENST00000464867 REP15Q6BDI9 236 aa8.1□□□□□ -1.11
APP-213ENST00000464867 FAM180BQ6P0A1 224 aa8.1□□□□□ -1.11
APP-213ENST00000464867 SPATA21Q7Z572 469 aa8.1□□□□□ -1.11
APP-213ENST00000464867 KIR3DL3Q8N743 410 aa8.1□□□□□ -1.11
APP-213ENST00000464867 WDR31Q8NA23 367 aa8.1□□□□□ -1.11
APP-213ENST00000464867 C1orf162Q8NEQ5 155 aaPredicted RBP8.1□□□□□ -1.11
APP-213ENST00000464867 OR4F15Q8NGB8 312 aa8.1□□□□□ -1.11
APP-213ENST00000464867 OR9A2Q8NGT5 310 aa8.1□□□□□ -1.11
APP-213ENST00000464867 GTF3AQ92664 365 aaKnown RBP8.1□□□□□ -1.11
APP-213ENST00000464867 ARL8AQ96BM9 186 aa8.1□□□□□ -1.11
APP-213ENST00000464867 RAB39BQ96DA2 213 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms