RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PGCP20142 388 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 ENPP1P22413 925 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 UQCRC2P22695 453 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 CCR4P51679 360 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 CLNS1AP54105 237 aaKnown RBP12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 TIGD2Q4W5G0 525 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 ATAD3BQ5T9A4 648 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 ADAM5Q6NVV9 412 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 C3orf33Q6P1S2 294 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 C16orf62Q7Z3J2 963 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 ATP6V1C2Q8NEY4 427 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 OR4A15Q8NGL6 344 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 RFWD2Q8NHY2 731 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 TMEM171Q8WVE6 324 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 HSD17B8Q92506 261 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 S100PBPQ96BU1 408 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 PERPQ96FX8 193 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 Q96MF0 132 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 SORT1Q99523 831 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 THUMPD3Q9BV44 507 aaKnown RBP12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 C20orf27Q9GZN8 174 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 OR51I1Q9H343 314 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 NGBQ9NPG2 151 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 SERINC1Q9NRX5 453 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 ACER3Q9NUN7 267 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 MKLN1Q9UL63 735 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 HIVEP2P31629 2446 aa12.77□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF724A8MTY0 619 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 KIAA0513O60268 411 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 CYTIPO60759 359 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 CSTAP01040 98 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 LBPP18428 481 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 IL32P24001 234 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 OR3A2P47893 321 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 SLC1A6P48664 564 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 PTH2RP49190 550 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 SESN3P58005 492 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 PHC1P78364 1004 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 CASP8Q14790 479 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 TNFAIP8L3Q5GJ75 292 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 SAXO2Q658L1 398 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 Q6ZT83 130 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 SSX8Q7RTT4 187 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 CLEC4FQ8N1N0 589 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 FAM71CQ8NEG0 241 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 SLC25A43Q8WUT9 341 aaPredicted RBP12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 KISS1RQ969F8 398 aaPredicted RBP12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 NEURL3Q96EH8 262 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 PPP1R36Q96LQ0 422 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 PSD2Q9BQI7 771 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 SAP130Q9H0E3 1048 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 CXorf56Q9H5V9 222 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 ING1Q9UK53 422 aaPredicted RBP12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 SLC35A3Q9Y2D2 325 aa12.76□□□□□ -0.37
SNRNP40-203ENST00000463988 A0A1W2PNR3 127 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF814B7Z6K7 855 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 H7C1Q1 480 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 H6PDO95479 791 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 CNOT4O95628 575 aaKnown RBP12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 PLAUP00749 431 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 ADAP00813 363 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 UBTFL6P0CB48 400 aaPredicted RBP12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 OR12D1P0DN82 309 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 FKBP2P26885 142 aaKnown RBP12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 PGM1P36871 562 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 APOBEC1P41238 236 aaKnown RBP12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 CSNK2A1P68400 391 aaPredicted RBP12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 TXNL4AP83876 142 aaKnown RBP12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 MERTKQ12866 999 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 ITGADQ13349 1161 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 TYW3Q6IPR3 259 aaKnown RBP12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 OGFOD2Q6N063 350 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 TMPPEQ6ZT21 453 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 CROCCP2Q86T23 111 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 XAGE5Q8WWM1 108 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 OR5B2Q96R09 309 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 PARD6BQ9BYG5 372 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 ESRP2Q9H6T0 727 aaKnown RBP12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 MEAF6Q9HAF1 191 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 BTNL2Q9UIR0 455 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 WDR45Q9Y484 360 aa12.75□□□□□ -0.37
SNRNP40-203ENST00000463988 CADP27708 2225 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 IGHV3-15A0A0B4J1V0 119 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 CENPVL1A0A0U1RR11 272 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 E9PBE3 544 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 SMAD9O15198 467 aaKnown RBP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 CYP7B1O75881 506 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 CPSF4O95639 269 aaKnown RBP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 LY6G6DO95868 133 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 BGNP21810 368 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 S100A3P33764 101 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 DIO1P49895 249 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 KHKP50053 298 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 RASGEF1BQ0VAM2 473 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 STX3Q13277 289 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 MPP2Q14168 576 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 PDK3Q15120 406 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 TAB1Q15750 504 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 MAPK14Q16539 360 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms