RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TMEM200AQ86VY9 491 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 KIF18BQ86Y91 864 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 C10orf111Q8N326 155 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 ZNF610Q8N9Z0 462 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 MTHFD2LQ9H903 347 aaPredicted RBP11.6□□□□□ -0.55
XRN1-203ENST00000463916 SLC24A3Q9HC58 644 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 RLIMQ9NVW2 624 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 SLC35A3Q9Y2D2 325 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 A0A1W2PNR3 127 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 NR5A2O00482 541 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 AP3D1O14617 1153 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 KLK2P20151 261 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 CPOXP36551 454 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 ANXA11P50995 505 aaKnown RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 EEF1A1P68104 462 aaKnown RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 TXNL4AP83876 142 aaKnown RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 SORDQ00796 357 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 AKAP6Q13023 2319 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 AGKQ53H12 422 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 EEF1A1P5Q5VTE0 462 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 FAM222BQ8WU58 562 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 OIT3Q8WWZ8 545 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 SPDL1Q96EA4 605 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 GPATCH1Q9BRR8 931 aaKnown RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 NPHS2Q9NP85 383 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 PAQR5Q9NXK6 330 aaPredicted RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 MCTS1Q9ULC4 181 aaKnown RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 VPS13CQ709C8 3753 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 DSPPQ9NZW4 1301 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 A0A096LPI6 279 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 CLIC1O00299 241 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 BCHEP06276 602 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 EPXP11678 715 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 FCGR2AP12318 317 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 PGCP20142 388 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 ENPP1P22413 925 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 DSTNP60981 165 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 RGNQ15493 299 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 ZNF239Q16600 458 aaKnown RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 RPS26P11Q5JNZ5 115 aaPredicted RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 PLEKHM3Q6ZWE6 761 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 ABHD3Q8WU67 409 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 ST8SIA1Q92185 356 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 MAL2Q969L2 176 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 GMPPAQ96IJ6 420 aaPredicted RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 CCDC106Q9BWC9 280 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 ACER3Q9NUN7 267 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 DNAJB12Q9NXW2 375 aaKnown RBP11.59□□□□□ -0.55
XRN1-203ENST00000463916 VAPAQ9P0L0 249 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 P2RX2Q9UBL9 471 aa11.59□□□□□ -0.55
XRN1-203ENST00000463916 IGHV3-15A0A0B4J1V0 119 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 A6NNC1 897 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 SS18L1O75177 396 aaPredicted RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 SYNGR4O95473 234 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 CD8BP10966 210 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 IL7RP16871 459 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 PEX19P40855 299 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 MAGEA8P43361 318 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 MERTKQ12866 999 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 SELENBP1Q13228 472 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 LRIF1Q5T3J3 769 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 MRPL2Q5T653 305 aaKnown RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 C22orf34Q6ZV56 151 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 VRK2Q86Y07 508 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 ARFGAP2Q8N6H7 521 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 RNF128Q8TEB7 428 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 RSPO3Q9BXY4 272 aaPredicted RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 LIME1Q9H400 295 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 IKZF5Q9H5V7 419 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 ZNF385DQ9H6B1 395 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 EXOSC3Q9NQT5 275 aaKnown RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 CTPS2Q9NRF8 586 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 PLSCR4Q9NRQ2 329 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 RASSF1Q9NS23 344 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 CHST2Q9Y4C5 530 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 ABCA4P78363 2273 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 GJE1A6NN92 205 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 PLGP00747 810 aaPredicted RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 NCF2P19878 526 aaPredicted RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 CCKARP32238 428 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 IDH2P48735 452 aaKnown RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 ATP4BP51164 291 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 SQLEQ14534 574 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 DAZAP2Q15038 168 aaPredicted RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 PDSS1Q5T2R2 415 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 ADGRG3Q86Y34 549 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 ZNF563Q8TA94 476 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 WDR60Q8WVS4 1066 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 TMEM234Q8WY98 164 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 CPNE4Q96A23 557 aaPredicted RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 DNAJA3Q96EY1 480 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 TMEM19Q96HH6 336 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 OR5B2Q96R09 309 aa11.58□□□□□ -0.56
XRN1-203ENST00000463916 ING1Q9UK53 422 aaPredicted RBP11.58□□□□□ -0.56
XRN1-203ENST00000463916 TRBV5-3A0A0A0MS03 114 aa11.57□□□□□ -0.56
XRN1-203ENST00000463916 A0A0G2JND7 137 aa11.57□□□□□ -0.56
XRN1-203ENST00000463916 DBIP07108 87 aaKnown RBP11.57□□□□□ -0.56
XRN1-203ENST00000463916 SLC7A1P30825 629 aa11.57□□□□□ -0.56
XRN1-203ENST00000463916 C3orf33Q6P1S2 294 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms