RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 TIMM10P62072 90 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 DEFB115Q30KQ5 88 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 PVRIGQ6DKI7 326 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 Q7L0L9 218 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 UBE2Q2Q8WVN8 375 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 SLC13A3Q8WWT9 602 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 TMEM237Q96Q45 408 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 NRTNQ99748 197 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 WRAP53Q9BUR4 548 aaKnown RBP3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 USP16Q9Y5T5 823 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 ANKARQ7Z5J8 1434 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 FMN2Q9NZ56 1722 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 PARP4Q9UKK3 1724 aaKnown RBP3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 RPGRIP1LQ68CZ1 1315 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 LRRC37A3O60309 1634 aa3.66□□□□□ -1.82
CCDC144A-211ENST00000463809 RNF103-CHMP3A0A140T963 221 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 TRIM3O75382 744 aaPredicted RBP3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 ALPPP05187 535 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 ALPPL2P10696 532 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 AHCYP23526 432 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 BTDP43251 543 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 KIR2DS2P43631 304 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 TFDP1Q14186 410 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 CCDC40Q4G0X9 1142 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 TMEM52BQ4KMG9 183 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 CNSTQ6PJW8 725 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 SYVN1Q86TM6 617 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 NSMCE2Q96MF7 247 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 TBC1D10AQ9BXI6 508 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 XPO4Q9C0E2 1151 aaKnown RBP3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 NXF3Q9H4D5 531 aaKnown RBP3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 KCNN3Q9UGI6 736 aa3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 PRG3Q9Y2Y8 225 aaPredicted RBP3.65□□□□□ -1.83
CCDC144A-211ENST00000463809 CPDO75976 1380 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 ABCC11Q96J66 1382 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 PEAK1Q9H792 1746 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 PAPPAQ13219 1627 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 A0A0J9YXY3 114 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 SMIM28A0A1B0GU29 152 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 KRT87PA6NCN2 255 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 CASKO14936 926 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 SEC22BO75396 215 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 GAP43P17677 238 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 TSPAN8P19075 237 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 CD1BP29016 333 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 PRDX2P32119 198 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 PDK1Q15118 436 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 CDKN3Q16667 212 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 CCDC92Q53HC0 331 aaPredicted RBP3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 CYB5R2Q6BCY4 276 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 C1orf186Q6ZWK4 172 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 TAF8Q7Z7C8 310 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 VPS36Q86VN1 386 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 SKA3Q8IX90 412 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 OR52E1Q8NGJ3 308 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 MYDGFQ969H8 173 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 STARD4Q96DR4 205 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 TMEM121Q9BTD3 319 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 COG4Q9H9E3 785 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 PATZ1Q9HBE1 687 aaKnown RBP3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 APMAPQ9HDC9 416 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 TRPV5Q9NQA5 729 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 NANSQ9NR45 359 aa3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 HOOK1Q9UJC3 728 aaKnown RBP3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 EIF3LQ9Y262 564 aaKnown RBP3.64□□□□□ -1.83
CCDC144A-211ENST00000463809 CCDC7Q96M83 1385 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 CICQ96RK0 1608 aaPredicted RBP3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 E9PCH4 1651 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 TNRC6CQ9HCJ0 1690 aaKnown RBP3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 CFAP73A6NFT4 308 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 TCP11X1B4DZS4 312 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 TRAF3IP2O43734 574 aaPredicted RBP3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 MAPK3P27361 379 aaPredicted RBP3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 SFNP31947 248 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 UGT1A5P35504 534 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 GCKP35557 465 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 CTRLP40313 264 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 TOR1AIP1Q5JTV8 583 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 DNM1P46Q6ZS02 220 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 HSD11B1LQ7Z5J1 315 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 ZNF619Q8N2I2 560 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 C20orf203Q8NBC4 194 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 OR2T33Q8NG76 320 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 OR2AP1Q8NGE2 309 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 TRUB1Q8WWH5 349 aaKnown RBP3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 ELMO2Q96JJ3 720 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 GPN2Q9H9Y4 310 aaPredicted RBP3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 CYTL1Q9NRR1 136 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 RIMS3Q9UJD0 308 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 WDR45Q9Y484 360 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 CDH10Q9Y6N8 788 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 USP47Q96K76 1375 aa3.63□□□□□ -1.83
CCDC144A-211ENST00000463809 TRPM1Q7Z4N2 1603 aa3.62□□□□□ -1.83
CCDC144A-211ENST00000463809 THSD7BQ9C0I4 1608 aa3.62□□□□□ -1.83
CCDC144A-211ENST00000463809 PHRF1Q9P1Y6 1649 aaKnown RBP3.62□□□□□ -1.83
CCDC144A-211ENST00000463809 PDE4DIPQ5VU43 2346 aa3.62□□□□□ -1.83
CCDC144A-211ENST00000463809 PPIP5K1Q6PFW1 1433 aa3.62□□□□□ -1.83
CCDC144A-211ENST00000463809 NSD3Q9BZ95 1437 aa3.62□□□□□ -1.83
CCDC144A-211ENST00000463809 YTHDC2Q9H6S0 1430 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms