RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 RILPQ96NA2 401 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SERPINI1Q99574 410 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NPAS2Q99743 824 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CCT7Q99832 543 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SLC39A3Q9BRY0 314 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 KRTAP1-5Q9BYS1 174 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 LHPPQ9H008 270 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NSRP1Q9H0G5 558 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SLC25A32Q9H2D1 315 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 IKZF5Q9H5V7 419 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 EPS8L2Q9H6S3 715 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 MYNNQ9NPC7 610 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NECTIN3Q9NQS3 549 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SDR39U1Q9NRG7 319 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 IRAK4Q9NWZ3 460 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CCDC167Q9P0B6 97 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SEC14L3Q9UDX4 400 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 FBXL4Q9UKA2 621 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CES1P1Q9UKY3 287 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 DAPP1Q9UN19 280 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ARL2BPQ9Y2Y0 163 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 MEMO1Q9Y316 297 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HS3ST3B1Q9Y662 390 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SCN3AQ9NY46 2000 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 FN1P02751 2386 aaKnown RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 TRAV17A0A0B4J275 112 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 IGHV3-20A0A0C4DH32 117 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 LOC100653049A0A140TA62 436 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SLCO1B7G3V0H7 640 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SCAMP2O15127 329 aaKnown RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SRPX2O60687 465 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SLC19A2O60779 497 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 ALOX12BO75342 701 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 KRT34O76011 436 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 PLAUP00749 431 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CRYABP02511 175 aaKnown RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 ALPLP05186 524 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CT62P0C5K7 136 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 FAM58BPP0C7Q3 252 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 RHCEP18577 417 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 MAOAP21397 527 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CXCR2P25025 360 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 PTPN6P29350 595 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CDK9P50750 372 aaKnown RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 MAPK12P53778 367 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 MTTPP55157 894 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CASP9P55211 416 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CLDN8P56748 225 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 TNFRSF17Q02223 184 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 KLC1Q07866 573 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 RGS1Q08116 209 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 C2orf80Q0P641 193 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 PDE7AQ13946 482 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CAPRIN1Q14444 709 aaKnown RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SQLEQ14534 574 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 FAM174BQ3ZCQ3 159 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 NKAIN1Q4KMZ8 207 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 AGKQ53H12 422 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SPIN4Q56A73 249 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CCNYL2Q5T2Q4 361 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 NDUFAF5Q5TEU4 345 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 GKAP1Q5VSY0 366 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 REP15Q6BDI9 236 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 TRIM40Q6P9F5 258 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 RINLQ6ZS11 566 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 LANCL3Q6ZV70 420 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 OLIG3Q7RTU3 272 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SPATA19Q7Z5L4 167 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 BIVMQ86UB2 503 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 CAMKVQ8NCB2 501 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 PHF10Q8WUB8 498 aaKnown RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 IPCEF1Q8WWN9 437 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 UBE2E3Q969T4 207 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 EXOSC8Q96B26 276 aaKnown RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 PPWD1Q96BP3 646 aaKnown RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 RCN3Q96D15 328 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 MMABQ96EY8 250 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 OTUB1Q96FW1 271 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 AURKBQ96GD4 344 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF681Q96N22 645 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SLC26A1Q9H2B4 701 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 FANCEQ9HB96 536 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SIRT3Q9NTG7 399 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SLC25A37Q9NYZ2 338 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 IFT80Q9P2H3 777 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF580Q9UK33 172 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 SLC22A7Q9Y694 548 aa3.3□□□□□ -1.88
SCFD1-204ENST00000463622 TRBV5-3A0A0A0MS03 114 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 A0A1B0GX78 115 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GNG14A0A1W2PPG7 69 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 A0A1W2PQ72 361 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 SLC22A23A1A5C7 686 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ERICH4A6NGS2 130 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 VSTM2BA6NLU5 285 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 CCT8L1PA6NM43 557 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 PSMD12O00232 456 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 INMTO95050 263 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 BMP10O95393 424 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 NSA2O95478 260 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 C6orf47O95873 294 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms