RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 LCP2Q13094 533 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 EXOSC6Q5RKV6 272 aaKnown RBP13.86□□□□□ -0.19
SND1-203ENST00000463020 TMEM201Q5SNT2 666 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 FAM91A1Q658Y4 838 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 FCRLAQ7L513 359 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 ATP6V1C2Q8NEY4 427 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 FBXO27Q8NI29 283 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 ACTRT2Q8TDY3 377 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 NSL1Q96IY1 281 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 ZNF300Q96RE9 604 aaPredicted RBP13.86□□□□□ -0.19
SND1-203ENST00000463020 C19orf24Q9BVV8 132 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 CACNG6Q9BXT2 260 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 HDHD5Q9BXW7 423 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 MRTO4Q9UKD2 239 aaKnown RBP13.86□□□□□ -0.19
SND1-203ENST00000463020 EMCNQ9ULC0 261 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 CCL27Q9Y4X3 112 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 PLCE1Q9P212 2302 aa13.86□□□□□ -0.19
SND1-203ENST00000463020 A0A1W2PNR3 127 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 ABCD4O14678 606 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 LY6HO94772 140 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 ATP6V1G2O95670 118 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 ENO1P06733 434 aaKnown RBP13.85□□□□□ -0.19
SND1-203ENST00000463020 IGHV4-31P0DP07 118 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 IGHV1-2P23083 117 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 SLC1A6P48664 564 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 MNAT1P51948 309 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 ITGADQ13349 1161 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 KIAA0040Q15053 153 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 TMEM176BQ3YBM2 270 aaPredicted RBP13.85□□□□□ -0.19
SND1-203ENST00000463020 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.85□□□□□ -0.19
SND1-203ENST00000463020 NOXRED1Q6NXP6 359 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 B4GALNT2Q8NHY0 566 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 L3HYPDHQ96EM0 354 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 TNFRSF13CQ96RJ3 184 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 PSD2Q9BQI7 771 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 RHNO1Q9BSD3 238 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 MID1IP1Q9NPA3 183 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 FANCFQ9NPI8 374 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 GIN1Q9NXP7 522 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 BAIAP2L1Q9UHR4 511 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 HAO1Q9UJM8 370 aa13.85□□□□□ -0.19
SND1-203ENST00000463020 SLC35F4A4IF30 521 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 TMEM114B3SHH9 223 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 NPIPB8E9PQR5 432 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 ZNF195O14628 629 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 YES1P07947 543 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 CALB2P22676 271 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 ME2P23368 584 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 ATP5F1P24539 256 aaPredicted RBP13.84□□□□□ -0.19
SND1-203ENST00000463020 GSTM5P46439 218 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 OR3A2P47893 321 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 NUDT6P53370 316 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 PKNOX1P55347 436 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 VLDLRP98155 873 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 PPA1Q15181 289 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 RNPS1Q15287 305 aaKnown RBP13.84□□□□□ -0.19
SND1-203ENST00000463020 SZRD1Q7Z422 152 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 NUP43Q8NFH3 380 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 CLHC1Q8NHS4 586 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 KCNK17Q96T54 332 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 SHCBP1LQ9BZQ2 653 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 ALG2Q9H553 416 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 C3orf14Q9HBI5 128 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 NTMQ9P121 344 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 STOML1Q9UBI4 398 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 CDC42EP3Q9UKI2 254 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 STK38LQ9Y2H1 464 aa13.84□□□□□ -0.19
SND1-203ENST00000463020 A0A1W2PR80 420 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 ELOA3DA6NLF2 546 aaPredicted RBP13.83□□□□□ -0.2
SND1-203ENST00000463020 SMAD9O15198 467 aaKnown RBP13.83□□□□□ -0.2
SND1-203ENST00000463020 PDPK1O15530 556 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 AKAP10O43572 662 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 PRKD3O94806 890 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 H6PDO95479 791 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 KRT16P08779 473 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 IGFBP5P24593 272 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 AQP5P55064 265 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 CASP9P55211 416 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 ABCE1P61221 599 aaKnown RBP13.83□□□□□ -0.2
SND1-203ENST00000463020 LOXL1Q08397 574 aaPredicted RBP13.83□□□□□ -0.2
SND1-203ENST00000463020 PCLAFQ15004 111 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 ELOA3BQ3SY89 546 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 Q6ZT83 130 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 TRIM46Q7Z4K8 759 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 C10orf107Q8IVU9 208 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 ARHGAP24Q8N264 748 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 CDRT4Q8N9R6 151 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 ELOA3Q8NG57 546 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 OR2T11Q8NH01 316 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 CPNE4Q96A23 557 aaPredicted RBP13.83□□□□□ -0.2
SND1-203ENST00000463020 GRIP2Q9C0E4 1043 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 BARX1Q9HBU1 254 aaPredicted RBP13.83□□□□□ -0.2
SND1-203ENST00000463020 ICAM5Q9UMF0 924 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 TRIM33Q9UPN9 1127 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 CARD8Q9Y2G2 431 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 KCNE3Q9Y6H6 103 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 MEGF8Q7Z7M0 2845 aa13.83□□□□□ -0.2
SND1-203ENST00000463020 GOLGA8QA0A0J9YX86 632 aa13.82□□□□□ -0.2
SND1-203ENST00000463020 GOLGA8OA6NCC3 632 aa13.82□□□□□ -0.2
SND1-203ENST00000463020 GOLGA8NF8WBI6 632 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms