RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 KLHL26Q53HC5 615 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 COX20Q5RI15 118 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 CGB2Q6NT52 195 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 DNAJC14Q6Y2X3 702 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 FRRS1Q6ZNA5 592 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 MSANTD1Q6ZTZ1 278 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 P4HA3Q7Z4N8 544 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 RNF130Q86XS8 419 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 MIER2Q8N344 545 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 METTL25Q8N6Q8 603 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR5M1Q8NGP8 315 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 RFWD2Q8NHY2 731 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 FNDC9Q8TBE3 224 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZFP90Q8TF47 636 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 DUSP19Q8WTR2 217 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZNF524Q96C55 264 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZC3HAV1LQ96H79 300 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZNF845Q96IR2 970 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 OR52E6Q96RD3 313 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZBTB18Q99592 522 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 SLC35A5Q9BS91 424 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 TBL1XR1Q9BZK7 514 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 SLC52A3Q9NQ40 469 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 UBQLN4Q9NRR5 601 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ELOVL5Q9NYP7 299 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZNF337Q9Y3M9 751 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 ZNF175Q9Y473 711 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 MALRD1Q5VYJ5 2156 aa7.09□□□□□ -1.27
CDC42BPA-210ENST00000462553 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 FAM234BA2RU67 622 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 C16orf97H3BN30 126 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 HMGN4O00479 90 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 SCDO00767 359 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 SEC14L5O43304 696 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 KLF4O43474 513 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 NDUFB5O43674 189 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 GMFGO60234 142 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 FCMRO60667 390 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 BCAS1O75363 584 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 AQP8O94778 261 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 AK1P00568 194 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 PLAUP00749 431 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 IL6P05231 212 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 CHRM4P08173 479 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 NID1P14543 1247 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 HK1P19367 917 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 PSMA4P25789 261 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 KHKP50053 298 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 ATP4BP51164 291 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 POLR2JP52435 117 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 ATP12AP54707 1039 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF117Q03924 483 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 C17orf67Q0P5P2 114 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 PON3Q15166 354 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 MAPK11Q15759 364 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF141Q15928 474 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 MAPK14Q16539 360 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 NDUFAF6Q330K2 333 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 PDZK1Q5T2W1 519 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 RAET1LQ5VY80 246 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 AP1ARQ63HQ0 302 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 TYW3Q6IPR3 259 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 BHLHB9Q6PI77 547 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 CBLN3Q6UW01 205 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 GGNQ86UU5 652 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 MSRB3Q8IXL7 192 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF610Q8N9Z0 462 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 VPS37AQ8NEZ2 397 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 SPATA3Q8NHX4 192 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 POC1BQ8TC44 478 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 GTF2H4Q92759 462 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 RAB8BQ92930 207 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 VPS33AQ96AX1 596 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 THOC1Q96FV9 657 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 CHMP6Q96FZ7 201 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 SH3YL1Q96HL8 342 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 PANX1Q96RD7 426 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 TMEM204Q9BSN7 226 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 PINK1Q9BXM7 581 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 NMUR2Q9GZQ4 415 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 PAIP1Q9H074 479 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 SLC38A1Q9H2H9 487 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 SDHAF3Q9NRP4 125 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF701Q9NV72 531 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 PCDHGB4Q9UN71 923 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 VDAC3Q9Y277 283 aa7.08□□□□□ -1.28
CDC42BPA-210ENST00000462553 TRBV5-3A0A0A0MS03 114 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 C7orf72A4D263 438 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 DUXAA6NLW8 204 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 H3BML4 177 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 RFXANKO14593 260 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 DNAJA2O60884 412 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 UGT2B17O75795 530 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 GUSBP08236 651 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 LINGO3P0C6S8 592 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZCCHC18P0CG32 403 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF17P17021 662 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 ATP6V1C1P21283 382 aa7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 RPS4Y1P22090 263 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-210ENST00000462553 CHI3L1P36222 383 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms