RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ZNF724A8MTY0 619 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 ZNF814B7Z6K7 855 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 NPIPB9F8W1W9 429 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 SULT2B1O00204 365 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 CYTIPO60759 359 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 AGR2O95994 175 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 CSTAP01040 98 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 IFNA2P01563 188 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 TFPIP10646 304 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 GGT1P19440 569 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 MATN1P21941 496 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 MERTKQ12866 999 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 TIMM23BQ5SRD1 257 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 ATAD3BQ5T9A4 648 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 DNAJC14Q6Y2X3 702 aaPredicted RBP13.64□□□□□ -0.23
SKA3-204ENST00000462482 UBE2J2Q8N2K1 259 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 KRTCAP2Q8N6L1 136 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 OR5D16Q8NGK9 328 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 LILRB1Q8NHL6 650 aaPredicted RBP13.64□□□□□ -0.23
SKA3-204ENST00000462482 RADILQ96JH8 1075 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 SLC35G5Q96KT7 338 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 ADAD1Q96M93 576 aaKnown RBP13.64□□□□□ -0.23
SKA3-204ENST00000462482 SDF2Q99470 211 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 THUMPD3Q9BV44 507 aaKnown RBP13.64□□□□□ -0.23
SKA3-204ENST00000462482 MECRQ9BV79 373 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 JMJD1CQ15652 2540 aa13.64□□□□□ -0.23
SKA3-204ENST00000462482 RNF103-CHMP3A0A140T963 221 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 CIB4A0PJX0 185 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 DPRXA6NFQ7 191 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 C9JVG2 144 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 TLX2O43763 284 aaPredicted RBP13.63□□□□□ -0.23
SKA3-204ENST00000462482 SPAG7O75391 227 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 ACVR1BP36896 505 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 CDH11P55287 796 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 HBA1P69905 142 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 NRF1Q16656 503 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 AGAP6Q5VW22 663 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 KLHL17Q6TDP4 642 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 ZCCHC23Q6ZST2 131 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 CXXC5Q7LFL8 322 aaKnown RBP13.63□□□□□ -0.23
SKA3-204ENST00000462482 C6orf120Q7Z4R8 191 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 DEPDC4Q8N2C3 294 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 MAPK1IP1LQ8NDC0 245 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 VPS37AQ8NEZ2 397 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 SPATA3Q8NHX4 192 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 ZNF563Q8TA94 476 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 NEUROG1Q92886 237 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 ZNF775Q96BV0 537 aaPredicted RBP13.63□□□□□ -0.23
SKA3-204ENST00000462482 TRIM2Q9C040 744 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 QRSL1Q9H0R6 528 aaKnown RBP13.63□□□□□ -0.23
SKA3-204ENST00000462482 NOP53Q9NZM5 478 aaKnown RBP13.63□□□□□ -0.23
SKA3-204ENST00000462482 SLC17A7Q9P2U7 560 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 PRSS50Q9UI38 385 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 POU2F3Q9UKI9 436 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 MGAT4BQ9UQ53 548 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 ARID1AO14497 2285 aa13.63□□□□□ -0.23
SKA3-204ENST00000462482 CCT8L1PA6NM43 557 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 ETV2O00321 342 aaPredicted RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 ANKRD28O15084 1053 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 SMAD9O15198 467 aaKnown RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 UBTFL6P0CB48 400 aaPredicted RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 FKBP2P26885 142 aaKnown RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 APOBEC1P41238 236 aaKnown RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 DIO1P49895 249 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 SESN3P58005 492 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 RPS26P62854 115 aaKnown RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 SKP2Q13309 424 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 ZNF141Q15928 474 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 SYT14P1Q58G82 188 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 TMEM108Q6UXF1 575 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 TMPPEQ6ZT21 453 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 MTDHQ86UE4 582 aaKnown RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 TCP10LQ8TDR4 215 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 OIT3Q8WWZ8 545 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 C3orf30Q96M34 536 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 ZNF300Q96RE9 604 aaPredicted RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 RHNO1Q9BSD3 238 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 TRAF4Q9BUZ4 470 aaPredicted RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 GRIP2Q9C0E4 1043 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 YAE1D1Q9NRH1 226 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 ACER3Q9NUN7 267 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 ZDHHC2Q9UIJ5 367 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 MKLN1Q9UL63 735 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 SLC35A3Q9Y2D2 325 aa13.62□□□□□ -0.23
SKA3-204ENST00000462482 NOSIPQ9Y314 301 aaKnown RBP13.62□□□□□ -0.23
SKA3-204ENST00000462482 OR5H1A6NKK0 313 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 GPR171O14626 319 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 ABCD4O14678 606 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 H6PDO95479 791 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 IGHV4-39P01824 125 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 G6PDP11413 515 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 CLDN8P56748 225 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 HPCAP84074 193 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 EMX2Q04743 252 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 SMU1Q2TAY7 513 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 PGGHGQ32M88 737 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 ARHGAP11BQ3KRB8 267 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 FBXW9Q5XUX1 488 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 RIMKLAQ8IXN7 391 aa13.61□□□□□ -0.23
SKA3-204ENST00000462482 OR4A15Q8NGL6 344 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms