RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ABHD3Q8WU67 409 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 TMEM234Q8WY98 164 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ROBO4Q8WZ75 1007 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF75CPQ92670 426 aaPredicted RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 OSTF1Q92882 214 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF524Q96C55 264 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 REXO5Q96IC2 774 aaKnown RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ATP6V1G3Q96LB4 118 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 C7orf26Q96N11 449 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 QRSL1Q9H0R6 528 aaKnown RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 C12orf49Q9H741 205 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 SDR39U1Q9NRG7 319 aaPredicted RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 CCM2LQ9NUG4 571 aaPredicted RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF226Q9NYT6 803 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 KLHL13Q9P2N7 655 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 EDARQ9UNE0 448 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 USH1CQ9Y6N9 552 aa9.09□□□□□ -0.95
SF3A3-204ENST00000462258 ZNF469Q96JG9 3925 aaPredicted RBP9.09□□□□□ -0.95
SF3A3-204ENST00000462258 RAI1Q7Z5J4 1906 aaPredicted RBP9.08□□□□□ -0.96
SF3A3-204ENST00000462258 A0A1W2PNR3 127 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 A0A1W2PPR1 153 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 C16orf97H3BN30 126 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 UBDO15205 165 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 POLR3GO15318 223 aaPredicted RBP9.08□□□□□ -0.96
SF3A3-204ENST00000462258 ANP32DO95626 131 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 KRT75O95678 551 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 RAF1P04049 648 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 CHRM4P08173 479 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 CRYGSP22914 178 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 SESN3P58005 492 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 PLAURQ03405 335 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 CHRNEQ04844 493 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 MERTKQ12866 999 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 RNPS1Q15287 305 aaKnown RBP9.08□□□□□ -0.96
SF3A3-204ENST00000462258 SYPL1Q16563 259 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 COX20Q5RI15 118 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 GTF2IRD2BQ6EKJ0 949 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 MSANTD1Q6ZTZ1 278 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 PLEKHM3Q6ZWE6 761 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 FCRLAQ7L513 359 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 GTF2IRD2Q86UP8 949 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 STK32CQ86UX6 486 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 MIER2Q8N344 545 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 ZNF563Q8TA94 476 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 SLC25A43Q8WUT9 341 aaPredicted RBP9.08□□□□□ -0.96
SF3A3-204ENST00000462258 WDR60Q8WVS4 1066 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 DYDC1Q8WWB3 177 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 MS4A3Q96HJ5 214 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 WFIKKN1Q96NZ8 548 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 TRNT1Q96Q11 434 aaKnown RBP9.08□□□□□ -0.96
SF3A3-204ENST00000462258 OR5B2Q96R09 309 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 FOXC2Q99958 501 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 KLHL4Q9C0H6 718 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 SLC38A1Q9H2H9 487 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 RMND5AQ9H871 391 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 PLEKHF2Q9H8W4 249 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 FANCFQ9NPI8 374 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 EXOSC3Q9NQT5 275 aaKnown RBP9.08□□□□□ -0.96
SF3A3-204ENST00000462258 SLC6A13Q9NSD5 602 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 C6orf203Q9P0P8 240 aaPredicted RBP9.08□□□□□ -0.96
SF3A3-204ENST00000462258 P2RX2Q9UBL9 471 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 LIPT1Q9Y234 373 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 MED13LQ71F56 2210 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 VPS13CQ709C8 3753 aa9.08□□□□□ -0.96
SF3A3-204ENST00000462258 ITPR3Q14573 2671 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 IGHV3-15A0A0B4J1V0 119 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 CLDN24A6NM45 220 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 DEFB108AA8MXU0 73 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 SIAH2O43255 324 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 ATE1O95260 518 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 NR2F1P10589 423 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 RPS4Y1P22090 263 aaKnown RBP9.07□□□□□ -0.96
SF3A3-204ENST00000462258 RYKP34925 604 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 MAGEA8P43361 318 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 POLR2JP52435 117 aaKnown RBP9.07□□□□□ -0.96
SF3A3-204ENST00000462258 RAC3P60763 192 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 STX1BP61266 288 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 KEAP1Q14145 624 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 GTDC1Q4AE62 458 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 SYT14P1Q58G82 188 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 TMEM201Q5SNT2 666 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 C6orf10Q5SRN2 563 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 EPGNQ6UW88 154 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 LRRC74BQ6ZQY2 392 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 BEND4Q6ZU67 534 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 ARFGAP2Q8N6H7 521 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 GOLGA6L1Q8N7Z2 621 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 VPS33AQ96AX1 596 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 PIK3IP1Q96FE7 263 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 ZC3HAV1LQ96H79 300 aaKnown RBP9.07□□□□□ -0.96
SF3A3-204ENST00000462258 ITCHQ96J02 903 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 ALPK1Q96QP1 1244 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 TACO1Q9BSH4 297 aaKnown RBP9.07□□□□□ -0.96
SF3A3-204ENST00000462258 CXXC4Q9H2H0 198 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 GP6Q9HCN6 339 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 SLCO1B3Q9NPD5 702 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 TCF7L2Q9NQB0 619 aa9.07□□□□□ -0.96
SF3A3-204ENST00000462258 PLSCR4Q9NRQ2 329 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms