RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 SIMC1Q8NDZ2 872 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 FAM71CQ8NEG0 241 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 OR52N1Q8NH53 320 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 MCFD2Q8NI22 146 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 SLC2A12Q8TD20 617 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 NAT6Q93015 286 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 BPIFA2Q96DR5 249 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 OPALINQ96PE5 141 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 SLIRPQ9GZT3 109 aaKnown RBP13□□□□□ -0.33
ERCC3-205ENST00000460485 SYNDIG1Q9H7V2 258 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 UBQLN4Q9NRR5 601 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 WDR70Q9NW82 654 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 CRNNQ9UBG3 495 aaPredicted RBP13□□□□□ -0.33
ERCC3-205ENST00000460485 URB1O60287 2271 aaKnown RBP12.99□□□□□ -0.33
ERCC3-205ENST00000460485 A0A075B6Q4 140 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 A0A1B0GWA3 101 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 METTL15A6NJ78 407 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 SLC22A31A6NKX4 558 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 RIIAD1A6NNX1 92 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 C17orf105B2RV13 164 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 PATE3B3GLJ2 98 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 AKAP8O43823 692 aaKnown RBP12.99□□□□□ -0.33
ERCC3-205ENST00000460485 SDC3O75056 442 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 CBFA2T3O75081 653 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 MED26O95402 600 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 IL33O95760 270 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 CSTAP01040 98 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 IGHA1P01876 353 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 IGFBP1P08833 259 aaPredicted RBP12.99□□□□□ -0.33
ERCC3-205ENST00000460485 HBQ1P09105 142 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 HSMCR30P0CW71 290 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 PNMTP11086 282 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 CPEP16870 476 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 PAICSP22234 425 aaKnown RBP12.99□□□□□ -0.33
ERCC3-205ENST00000460485 SSTR4P31391 388 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 SLC6A8P48029 635 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 BNC1Q01954 994 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 ZNF45Q02386 682 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 NR0B2Q15466 257 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 ISXQ2M1V0 245 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 ALG10BQ5I7T1 473 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 TMEM71Q6P5X7 295 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 NPSR1Q6W5P4 371 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 LINC00114Q6XXX2 140 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 ATCAYQ86WG3 371 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 BCORP1Q8N888 145 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 RCBTB1Q8NDN9 531 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 PTCHD1Q96NR3 888 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 BBC3Q96PG8 261 aaPredicted RBP12.99□□□□□ -0.33
ERCC3-205ENST00000460485 RBCK1Q9BYM8 510 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 TGIF2Q9GZN2 237 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 SPRTNQ9H040 489 aaPredicted RBP12.99□□□□□ -0.33
ERCC3-205ENST00000460485 UBQLN3Q9H347 655 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 HHATLQ9HCP6 504 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 ZNF304Q9HCX3 659 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 CMC2Q9NRP2 79 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 UCKL1Q9NWZ5 548 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 COPS7AQ9UBW8 275 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 KLHL3Q9UH77 587 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 KLHL21Q9UJP4 597 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 SLC6A14Q9UN76 642 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 SSR3Q9UNL2 185 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 MAST4O15021 2626 aa12.99□□□□□ -0.33
ERCC3-205ENST00000460485 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 SPAARA0A1B0GVQ0 90 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 A0A1B0GVT2 93 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 A0A1W2PQD3 144 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 TMX2-CTNND1H3BSU7 103 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 SCDO00767 359 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 BHLHE40O14503 412 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 TO15178 435 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 ZNF3P17036 446 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 CD53P19397 219 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 MAOAP21397 527 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 OPRL1P41146 370 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 ACAA2P42765 397 aaKnown RBP12.98□□□□□ -0.33
ERCC3-205ENST00000460485 SLC37A1P57057 533 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 OR1D5P58170 312 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 ACTC1P68032 377 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 ACTA1P68133 377 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
ERCC3-205ENST00000460485 FOXD4Q12950 439 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-205ENST00000460485 GPR50Q13585 617 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 TPBGQ13641 420 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 RGS21Q2M5E4 152 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 C11orf91Q3C1V1 193 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 TRIM61Q5EBN2 209 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 WBP2NLQ6ICG8 309 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 SLC30A6Q6NXT4 461 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 SLC23A3Q6PIS1 610 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 DGAT2L6Q6ZPD8 337 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 RTL4Q6ZR62 310 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 TTLL10Q6ZVT0 673 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 CXXC5Q7LFL8 322 aaKnown RBP12.98□□□□□ -0.33
ERCC3-205ENST00000460485 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 BPHLQ86WA6 291 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-205ENST00000460485 SLC25A45Q8N413 288 aa12.98□□□□□ -0.33
ERCC3-205ENST00000460485 KLHL36Q8N4N3 616 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms