RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 LTBQ06643 244 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 TIGD2Q4W5G0 525 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 ATAD3BQ5T9A4 648 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 CLEC9AQ6UXN8 241 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 EIF3MQ7L2H7 374 aaKnown RBP20.25■□□□□ 0.83
PTPN4-207ENST00000460162 FAM71CQ8NEG0 241 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 TMEM234Q8WY98 164 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 Q96MF0 132 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 USB1Q9BQ65 265 aaKnown RBP20.25■□□□□ 0.83
PTPN4-207ENST00000460162 PSD2Q9BQI7 771 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 THUMPD3Q9BV44 507 aaKnown RBP20.25■□□□□ 0.83
PTPN4-207ENST00000460162 MKLN1Q9UL63 735 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 A0A1W2PNR3 127 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 HS3ST1O14792 307 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 ANKRD28O15084 1053 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 H6PDO95479 791 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 UBTFL6P0CB48 400 aaPredicted RBP20.24■□□□□ 0.83
PTPN4-207ENST00000460162 PAX1P15863 534 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 PGCP20142 388 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 ENPP1P22413 925 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 PTH2RP49190 550 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 P2RY6Q15077 328 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 SFRP5Q5T4F7 317 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 SAXO2Q658L1 398 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 ANKRD46Q86W74 232 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 ZNF611Q8N823 705 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 SLC25A43Q8WUT9 341 aaPredicted RBP20.24■□□□□ 0.83
PTPN4-207ENST00000460162 TMEM171Q8WVE6 324 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 KISS1RQ969F8 398 aaPredicted RBP20.24■□□□□ 0.83
PTPN4-207ENST00000460162 BDH2Q9BUT1 245 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 POTEKPQ9BYX7 375 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 CXorf56Q9H5V9 222 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 SLC35A3Q9Y2D2 325 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 WDR45Q9Y484 360 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 PRR14LQ5THK1 2151 aa20.24■□□□□ 0.83
PTPN4-207ENST00000460162 IGHV3-15A0A0B4J1V0 119 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 E9PBE3 544 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 SMAD9O15198 467 aaKnown RBP20.23■□□□□ 0.83
PTPN4-207ENST00000460162 CYP7B1O75881 506 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 LBPP18428 481 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 BGNP21810 368 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 KHKP50053 298 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 SESN3P58005 492 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 TNFAIP8L3Q5GJ75 292 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 TYW3Q6IPR3 259 aaKnown RBP20.23■□□□□ 0.83
PTPN4-207ENST00000460162 TNFAIP8L2Q6P589 184 aaPredicted RBP20.23■□□□□ 0.83
PTPN4-207ENST00000460162 NEURL3Q96EH8 262 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 OR5B2Q96R09 309 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 NUF2Q9BZD4 464 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 MEAF6Q9HAF1 191 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 NGBQ9NPG2 151 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 SERINC1Q9NRX5 453 aa20.23■□□□□ 0.83
PTPN4-207ENST00000460162 ING1Q9UK53 422 aaPredicted RBP20.23■□□□□ 0.83
PTPN4-207ENST00000460162 ABCA2Q9BZC7 2435 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 H7C1Q1 480 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 CYTIPO60759 359 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 PLAUP00749 431 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 OR12D1P0DN82 309 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 PGM1P36871 562 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 OR3A2P47893 321 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 PHC1P78364 1004 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 FUT5Q11128 374 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 ITGADQ13349 1161 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 CASP8Q14790 479 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 SYT14P1Q58G82 188 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 SPANXN4Q5MJ08 99 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 AP1ARQ63HQ0 302 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 OGFOD2Q6N063 350 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 Q6ZT83 130 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 OLIG3Q7RTU3 272 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 ROPN1LQ96C74 230 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 PARD6BQ9BYG5 372 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 SAP130Q9H0E3 1048 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 QRSL1Q9H0R6 528 aaKnown RBP20.22■□□□□ 0.83
PTPN4-207ENST00000460162 ACER3Q9NUN7 267 aa20.22■□□□□ 0.83
PTPN4-207ENST00000460162 SPIN1Q9Y657 262 aaPredicted RBP20.22■□□□□ 0.83
PTPN4-207ENST00000460162 CPSF4O95639 269 aaKnown RBP20.21■□□□□ 0.83
PTPN4-207ENST00000460162 ADAP00813 363 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 CASP9P55211 416 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 CSNK2A1P68400 391 aaPredicted RBP20.21■□□□□ 0.83
PTPN4-207ENST00000460162 HPCAP84074 193 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 RASGEF1BQ0VAM2 473 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 MERTKQ12866 999 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 STX3Q13277 289 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 TAB1Q15750 504 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 MAPK14Q16539 360 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 FAM174BQ3ZCQ3 159 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 CEP85LQ5SZL2 805 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 ADAM5Q6NVV9 412 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 FRRS1Q6ZNA5 592 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 Q71RC1 249 aaPredicted RBP20.21■□□□□ 0.83
PTPN4-207ENST00000460162 CROCCP2Q86T23 111 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 ZNF619Q8N2I2 560 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 XAGE5Q8WWM1 108 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 HSD17B8Q92506 261 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 RAB8BQ92930 207 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 SLC35A5Q9BS91 424 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 CENPHQ9H3R5 247 aa20.21■□□□□ 0.83
PTPN4-207ENST00000460162 ESRP2Q9H6T0 727 aaKnown RBP20.21■□□□□ 0.83
PTPN4-207ENST00000460162 ZNF701Q9NV72 531 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms