RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LSM5Q9Y4Y9 91 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 MAGEB4O15481 346 aaPredicted RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 STC2O76061 302 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 ADORA3P0DMS8 318 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 OR12D1P0DN82 309 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 ZP3P21754 424 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 THBS2P35442 1172 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 RPS19P39019 145 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 KCNC1P48547 511 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 SORDQ00796 357 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 HTR4Q13639 388 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 ZNF791Q3KP31 576 aaPredicted RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 RPL22L1Q6P5R6 122 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 DCLRE1CQ96SD1 692 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 MED18Q9BUE0 208 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 C11orf54Q9H0W9 315 aaPredicted RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 IGSF5Q9NSI5 407 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 LINC01565O15544 149 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 DPM1O60762 260 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 GPR37L1O60883 481 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 FZD7O75084 574 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 NDUFB2O95178 105 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 MT-ND4LP03901 98 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 HMGA1P17096 107 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 SOX3P41225 446 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 ZNF136P52737 540 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 SH3BP2P78314 561 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 FCN2Q15485 313 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 FLYWCH1Q4VC44 716 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 TMUB2Q71RG4 321 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 DPY19L4Q7Z388 723 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 UMODL1-AS1Q8N2C9 162 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 DNAAF1Q8NEP3 725 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 PGAP3Q96FM1 320 aaPredicted RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 PKMYT1Q99640 499 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 VPS25Q9BRG1 176 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 KLHL42Q9P2K6 505 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 TMEM82A0PJX8 343 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 K7EPK0 472 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 ANKRD28O15084 1053 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 PIPP12273 146 aaPredicted RBP9.15□□□□□ -0.94
UFD1-205ENST00000459854 CD1EP15812 388 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 VIPR2P41587 438 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 CAV2P51636 162 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 NDUFA6P56556 154 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 LBHQ53QV2 105 aaPredicted RBP9.15□□□□□ -0.94
UFD1-205ENST00000459854 FRMPD2BQ6IN97 320 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 FAM71E2Q8N5Q1 922 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 YIPF5Q969M3 257 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 ECHDC3Q96DC8 303 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 HRASLS5Q96KN8 279 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 PEBP4Q96S96 227 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 GSTO2Q9H4Y5 243 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 SPHK2Q9NRA0 654 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 TRDV1A0A1B0GX56 115 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 MT-ND4P03905 459 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 BLKP51451 505 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 ZNF84P51523 738 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 CCR9P51686 369 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 ZNF266Q14584 549 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 LYPD4Q6UWN0 246 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 APOOLQ6UXV4 268 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 NUP43Q8NFH3 380 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 SPRYD4Q8WW59 207 aaPredicted RBP9.15□□□□□ -0.94
UFD1-205ENST00000459854 PRRC1Q96M27 445 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 SEC61A2Q9H9S3 476 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 DIMT1Q9UNQ2 313 aaKnown RBP9.15□□□□□ -0.94
UFD1-205ENST00000459854 GPR45Q9Y5Y3 372 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 NUMBLQ9Y6R0 609 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 HHLA1C9JL84 531 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 CD9P21926 228 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 AGTR2P50052 363 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 PPT1P50897 306 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 ADARB1P78563 741 aaKnown RBP9.15□□□□□ -0.94
UFD1-205ENST00000459854 RUNX3Q13761 415 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 UBXN2BQ14CS0 331 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 LY6G5CQ5SRR4 150 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 H3F3CQ6NXT2 135 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 FBXL22Q6P050 247 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 ISCA2Q86U28 154 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 SLC35F3Q8IY50 421 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 CELF2-AS1Q8N7Q2 184 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 OR4K1Q8NGD4 311 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 PTCHD1Q96NR3 888 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 NDRG2Q9UN36 371 aaKnown RBP9.15□□□□□ -0.94
UFD1-205ENST00000459854 NPFFR2Q9Y5X5 522 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 HS3ST4Q9Y661 456 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 MICAL3Q7RTP6 2002 aa9.15□□□□□ -0.94
UFD1-205ENST00000459854 GABRPO00591 440 aa9.15□□□□□ -0.95
UFD1-205ENST00000459854 CDC123O75794 336 aaPredicted RBP9.15□□□□□ -0.95
UFD1-205ENST00000459854 TOX4O94842 621 aa9.15□□□□□ -0.95
UFD1-205ENST00000459854 HLA-AP01891 365 aaKnown RBP9.15□□□□□ -0.95
UFD1-205ENST00000459854 MAS1P04201 325 aa9.15□□□□□ -0.95
UFD1-205ENST00000459854 PIM1P11309 404 aaPredicted RBP9.15□□□□□ -0.95
UFD1-205ENST00000459854 ACTR1BP42025 376 aa9.15□□□□□ -0.95
UFD1-205ENST00000459854 H3F3AP84243 136 aa9.15□□□□□ -0.95
UFD1-205ENST00000459854 MFGE8Q08431 387 aaPredicted RBP9.15□□□□□ -0.95
UFD1-205ENST00000459854 CLLU1Q5K131 121 aa9.15□□□□□ -0.95
UFD1-205ENST00000459854 PLBD1Q6P4A8 553 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms