RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ATP1B1P05026 303 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 HNRNPCL4P0DMR1 293 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 PPP3CBP16298 524 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 TEAD1P28347 426 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 CLDN2P57739 230 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 RGS8P57771 180 aaPredicted RBP9.56□□□□□ -0.88
CLIP4-208ENST00000456385 FLI1Q01543 452 aaPredicted RBP9.56□□□□□ -0.88
CLIP4-208ENST00000456385 RPE65Q16518 533 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 MAPK14Q16539 360 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 DECR1Q16698 335 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 FAM74A1Q5RGS3 127 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 HES5Q5TA89 166 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF626Q68DY1 528 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 USP50Q70EL3 339 aaPredicted RBP9.56□□□□□ -0.88
CLIP4-208ENST00000456385 UBE3DQ7Z6J8 389 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 METTL3Q86U44 580 aaKnown RBP9.56□□□□□ -0.88
CLIP4-208ENST00000456385 OR5M9Q8NGP3 310 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 OR5AR1Q8NGP9 310 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 ARSGQ96EG1 525 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 PRAP1Q96NZ9 151 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 OR14A2Q96R54 314 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 MCHR1Q99705 422 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 ARHGDIGQ99819 225 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 MACROD1Q9BQ69 325 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 GINS4Q9BRT9 223 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 VN1R3Q9BXE9 311 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 TMPRSS13Q9BYE2 586 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 SEMA4CQ9C0C4 833 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 OR2AG1Q9H205 316 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 SLC35C2Q9NQQ7 365 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 OPN4Q9UHM6 478 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 NUMA1Q14980 2115 aa9.56□□□□□ -0.88
CLIP4-208ENST00000456385 COL4A3Q01955 1670 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 SYNDIG1LA6NDD5 238 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 OR5K4A6NMS3 321 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 K7ESM1 405 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 BHLHE40O14503 412 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ASGR2P07307 311 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 CYBAP13498 195 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 PRG2P13727 222 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 CTGFP29279 349 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 MAT2AP31153 395 aaKnown RBP9.55□□□□□ -0.88
CLIP4-208ENST00000456385 MAGEB1P43366 347 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 NRG3P56975 720 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 RPS15P62841 145 aaKnown RBP9.55□□□□□ -0.88
CLIP4-208ENST00000456385 TGM3Q08188 693 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 CSRP2Q16527 193 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 TP53I3Q53FA7 332 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 UBE2NLQ5JXB2 153 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 PDSS1Q5T2R2 415 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 DCAF12L2Q5VW00 463 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 OR7E24Q6IFN5 339 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 FAM199XQ6PEV8 388 aaPredicted RBP9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF613Q6PF04 617 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ASPGQ86U10 573 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 CDH26Q8IXH8 852 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 OR6V1Q8N148 313 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF461Q8TAF7 563 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 PPP1R16AQ96I34 528 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 BBS4Q96RK4 519 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 IFT22Q9H7X7 185 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 C20orf141Q9NUB4 165 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ANKRD10Q9NXR5 420 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 TAS2R5Q9NYW4 299 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 NFKBIL1Q9UBC1 381 aaPredicted RBP9.55□□□□□ -0.88
CLIP4-208ENST00000456385 MYOFQ9NZM1 2061 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 NRG2O14511 850 aaPredicted RBP9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ABCD4O14678 606 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 EGFP01133 1207 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 SBK2P0C263 348 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 TIMP2P16035 220 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 MAKP20794 623 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ADH7P40394 386 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 FNTBP49356 437 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 TAS2R38P59533 333 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ERVK-25P63136 954 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 MAT1AQ00266 395 aaKnown RBP9.55□□□□□ -0.88
CLIP4-208ENST00000456385 TRAM1Q15629 374 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ZNF805Q5CZA5 627 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 PABPC1L2AQ5JQF8 200 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ELFN2Q5R3F8 820 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 CST9Q5W186 159 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 FCRLAQ7L513 359 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 NUDT13Q86X67 352 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ARL14Q8N4G2 192 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 EIF4E3Q8N5X7 224 aaKnown RBP9.55□□□□□ -0.88
CLIP4-208ENST00000456385 BOLLQ8N9W6 283 aaKnown RBP9.55□□□□□ -0.88
CLIP4-208ENST00000456385 PFN4Q8NHR9 129 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 FANK1Q8TC84 345 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 SMPDL3BQ92485 455 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 SLC25A38Q96DW6 304 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 LMLNQ96KR4 655 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ADGRL4Q9HBW9 690 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ST6GALNAC2Q9UJ37 374 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 ASF1AQ9Y294 204 aa9.55□□□□□ -0.88
CLIP4-208ENST00000456385 TP53BP1Q12888 1972 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-208ENST00000456385 TRAV1-2A0A0B4J238 106 aa9.54□□□□□ -0.88
CLIP4-208ENST00000456385 PYCARD-AS1I3L0S3 204 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms