RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 FOXN4Q96NZ1 517 aa20.37■□□□□ 0.85
PTPRA-208ENST00000455631 ANKZF1Q9H8Y5 726 aa20.37■□□□□ 0.85
PTPRA-208ENST00000455631 ASB6Q9NWX5 421 aa20.37■□□□□ 0.85
PTPRA-208ENST00000455631 NOSIPQ9Y314 301 aaKnown RBP20.37■□□□□ 0.85
PTPRA-208ENST00000455631 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.37■□□□□ 0.853e-6■■□□□ 11.9
PTPRA-208ENST00000455631 PRKAA2P54646 552 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 QPRTQ15274 297 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 KLHL26Q53HC5 615 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPRA-208ENST00000455631 SLC22A9Q8IVM8 553 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 DCAKDQ8WVC6 231 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 ARL8AQ96BM9 186 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 L3HYPDHQ96EM0 354 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 SOX7Q9BT81 388 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 FUT8Q9BYC5 575 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 BPESC1Q9GZL8 116 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 ZDHHC18Q9NUE0 388 aa20.36■□□□□ 0.85
PTPRA-208ENST00000455631 LOC390937A0A1W2PQ73 354 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 ATP6V1G2-DDX39BF2Z307 99 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 AKAP10O43572 662 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 ZNF23P17027 643 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 DIO1P49895 249 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 SLC7A5Q01650 507 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 MLC1Q15049 377 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 SLC25A53Q5H9E4 307 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 ABLIM2Q6H8Q1 611 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 OR7E24Q6IFN5 339 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 CDC73Q6P1J9 531 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 TRIM46Q7Z4K8 759 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 HOXD1Q9GZZ0 328 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 QRSL1Q9H0R6 528 aaKnown RBP20.35■□□□□ 0.85
PTPRA-208ENST00000455631 CDC42EP4Q9H3Q1 356 aaKnown RBP20.35■□□□□ 0.85
PTPRA-208ENST00000455631 GSTO2Q9H4Y5 243 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 RRAGDQ9NQL2 400 aaPredicted RBP20.35■□□□□ 0.85
PTPRA-208ENST00000455631 DUSP22Q9NRW4 184 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 SH3BP4Q9P0V3 963 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 ZNF180Q9UJW8 692 aa20.35■□□□□ 0.85
PTPRA-208ENST00000455631 CRCPO75575 148 aa20.34■□□□□ 0.85
PTPRA-208ENST00000455631 EFNA1P20827 205 aaPredicted RBP20.34■□□□□ 0.85
PTPRA-208ENST00000455631 SNRPD2P62316 118 aaKnown RBP20.34■□□□□ 0.85
PTPRA-208ENST00000455631 LASP1Q14847 261 aaKnown RBP20.34■□□□□ 0.85
PTPRA-208ENST00000455631 GABRA6Q16445 453 aa20.34■□□□□ 0.85
PTPRA-208ENST00000455631 EXOSC6Q5RKV6 272 aaKnown RBP20.34■□□□□ 0.85
PTPRA-208ENST00000455631 ANKS4BQ8N8V4 417 aa20.34■□□□□ 0.85
PTPRA-208ENST00000455631 TOR1AIP2Q8NFQ8 470 aa20.34■□□□□ 0.85
PTPRA-208ENST00000455631 OR5W2Q8NH69 310 aa20.34■□□□□ 0.85
PTPRA-208ENST00000455631 ZNF764Q96H86 408 aaPredicted RBP20.34■□□□□ 0.85
PTPRA-208ENST00000455631 MUS81Q96NY9 551 aa20.34■□□□□ 0.85
PTPRA-208ENST00000455631 STACQ99469 402 aa20.34■□□□□ 0.85
PTPRA-208ENST00000455631 REEP4Q9H6H4 257 aa20.34■□□□□ 0.85
PTPRA-208ENST00000455631 MYOZ1Q9NP98 299 aaPredicted RBP20.34■□□□□ 0.85
PTPRA-208ENST00000455631 ZCCHC3Q9NUD5 404 aaKnown RBP20.34■□□□□ 0.85
PTPRA-208ENST00000455631 IGKV3D-15A0A087WSY6 115 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 LRP5LA4QPB2 252 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 SULT2B1O00204 365 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 KCNAB3O43448 404 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 SEC22BO75396 215 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 HMGN2P05204 90 aaKnown RBP20.33■□□□□ 0.85
PTPRA-208ENST00000455631 ITGA5P08648 1049 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 FRKP42685 505 aaPredicted RBP20.33■□□□□ 0.85
PTPRA-208ENST00000455631 FOXG1P55316 489 aaPredicted RBP20.33■□□□□ 0.85
PTPRA-208ENST00000455631 CSNK2A1P68400 391 aaPredicted RBP20.33■□□□□ 0.85
PTPRA-208ENST00000455631 CBFBQ13951 182 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 SWI5Q1ZZU3 235 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 MST1LQ2TV78 715 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 TIGD2Q4W5G0 525 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 C9orf135Q5VTT2 229 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 BHLHB9Q6PI77 547 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 SLC46A3Q7Z3Q1 461 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 CCNYL1Q8N7R7 359 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 FAM120BQ96EK7 910 aaKnown RBP20.33■□□□□ 0.85
PTPRA-208ENST00000455631 VRK1Q99986 396 aaPredicted RBP20.33■□□□□ 0.85
PTPRA-208ENST00000455631 PIGUQ9H490 435 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 ACSS1Q9NUB1 689 aaPredicted RBP20.33■□□□□ 0.85
PTPRA-208ENST00000455631 MALT1Q9UDY8 824 aa20.33■□□□□ 0.85
PTPRA-208ENST00000455631 SNRPAP09012 282 aaKnown RBP20.32■□□□□ 0.84
PTPRA-208ENST00000455631 DCST2Q5T1A1 773 aa20.32■□□□□ 0.84
PTPRA-208ENST00000455631 TMPPEQ6ZT21 453 aa20.32■□□□□ 0.84
PTPRA-208ENST00000455631 WDR31Q8NA23 367 aa20.32■□□□□ 0.84
PTPRA-208ENST00000455631 TSSK3Q96PN8 268 aa20.32■□□□□ 0.84
PTPRA-208ENST00000455631 SERINC1Q9NRX5 453 aa20.32■□□□□ 0.84
PTPRA-208ENST00000455631 TMEFF2Q9UIK5 374 aaPredicted RBP20.32■□□□□ 0.84
PTPRA-208ENST00000455631 MOKQ9UQ07 419 aa20.32■□□□□ 0.84
PTPRA-208ENST00000455631 DTNAQ9Y4J8 743 aa20.32■□□□□ 0.84
PTPRA-208ENST00000455631 ZNF716A6NP11 495 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 ZNF264O43296 627 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 UBL4AP11441 157 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 ATP12AP54707 1039 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 SLC25A3Q00325 362 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 KIAA0040Q15053 153 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 PDK3Q15120 406 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 MTDHQ86UE4 582 aaKnown RBP20.31■□□□□ 0.84
PTPRA-208ENST00000455631 ZNF540Q8NDQ6 660 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 OR52E4Q8NGH9 312 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 CLHC1Q8NHS4 586 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 CCT7Q99832 543 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 BHLHE41Q9C0J9 482 aaPredicted RBP20.31■□□□□ 0.84
PTPRA-208ENST00000455631 AMDHD2Q9Y303 409 aa20.31■□□□□ 0.84
PTPRA-208ENST00000455631 NPIPB8E9PQR5 432 aa20.3■□□□□ 0.84
PTPRA-208ENST00000455631 ETV2O00321 342 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms