RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 GTPBP2Q9BX10 602 aaKnown RBP7.19□□□□□ -1.26
BRCC3-208ENST00000453705 ZNF696Q9H7X3 374 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 SFXN1Q9H9B4 322 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 UFSP2Q9NUQ7 469 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 ABI3Q9P2A4 366 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 DIMT1Q9UNQ2 313 aaKnown RBP7.19□□□□□ -1.26
BRCC3-208ENST00000453705 ERVW-1Q9UQF0 538 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 UBE2J1Q9Y385 318 aaPredicted RBP7.19□□□□□ -1.26
BRCC3-208ENST00000453705 OARD1Q9Y530 152 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 PCDHGC4Q9Y5F7 938 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 MUC3AQ02505 3323 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 MYOFQ9NZM1 2061 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 TTC24A2A3L6 582 aaPredicted RBP7.19□□□□□ -1.26
BRCC3-208ENST00000453705 OR51F1A6NGY5 319 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 FCGR3BO75015 233 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 CHRNGP07510 517 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 RAB40ALP0C0E4 278 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 PCSK6P29122 969 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 UGT2B10P36537 528 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 GSSP48637 474 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 RAB4BP61018 213 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 C16orf89Q6UX73 402 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 CYHR1Q6ZMK1 362 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 RNF144BQ7Z419 303 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 SPRED2Q7Z698 418 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 SDR9C7Q8NEX9 313 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 VN1R2Q8NFZ6 395 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 LHX4Q969G2 390 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 SNRNP40Q96DI7 357 aaKnown RBP7.19□□□□□ -1.26
BRCC3-208ENST00000453705 ATXN7L3BQ96GX2 97 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 RNF145Q96MT1 663 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 IFT27Q9BW83 186 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 TM6SF2Q9BZW4 377 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 ACTL8Q9H568 366 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 SLC28A3Q9HAS3 691 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 SMPD4Q9NXE4 827 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 COPS7AQ9UBW8 275 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 GPR132Q9UNW8 380 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 CEPT1Q9Y6K0 416 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 CDH23Q9H251 3354 aa7.19□□□□□ -1.26
BRCC3-208ENST00000453705 A0A087WV48 116 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 SERPINE3A8MV23 424 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 TMX2-CTNND1H3BSU7 103 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 M0QZ24 198 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 CCL16O15467 120 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 NUAK1O60285 661 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 FTH1P02794 183 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 FCGR1AP12314 374 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 DTYMKP23919 212 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 GSTM2P28161 218 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 NSG1P42857 185 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PRKAG1P54619 331 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PMPCAQ10713 525 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PDGFRLQ15198 375 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 GGTA1PQ4G0N0 100 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 RUNDC3AQ59EK9 446 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 C16orf62Q7Z3J2 963 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PGAM4Q8N0Y7 254 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PTGR2Q8N8N7 351 aaPredicted RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 TMEM104Q8NE00 496 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 MARCH1Q8TCQ1 289 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 SLC2A12Q8TD20 617 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 OR52B2Q96RD2 323 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 CD180Q99467 661 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 RBM24Q9BX46 236 aaKnown RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 HDHD5Q9BXW7 423 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 TAS2R9Q9NYW1 312 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 FBLN5Q9UBX5 448 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PCTPQ9UKL6 214 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 CLEC4EQ9ULY5 219 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 ASB1Q9Y576 335 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 TCF20Q9UGU0 1960 aaKnown RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 LOC105369274A0A096LPK9 316 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 LOC102723532A0A0G2JNH3 316 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 GLYATL1P3A0A0U1RQE8 302 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 TUBAL3A6NHL2 446 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 MAGEB17A8MXT2 336 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PPP6CO00743 305 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 RGS9O75916 674 aaPredicted RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 H6PDO95479 791 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 OCM2P0CE71 109 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 OCMP0CE72 109 aaPredicted RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 FCGR2AP12318 317 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 CBR1P16152 277 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PRPH2P23942 346 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 CHI3L1P36222 383 aaPredicted RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 CDK9P50750 372 aaKnown RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 MMP15P51511 669 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 RPL23AP62750 156 aaKnown RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 IRX4P78413 519 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 APOFQ13790 326 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 PTPRCAPQ14761 206 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 C18orf21Q32NC0 220 aaPredicted RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 ZNF658BQ4V348 819 aaPredicted RBP7.18□□□□□ -1.26
BRCC3-208ENST00000453705 GDPD4Q6W3E5 623 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 SLC16A12Q6ZSM3 486 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 FAM92BQ6ZTR7 304 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 OR4N4Q8N0Y3 316 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 SLC37A3Q8NCC5 494 aa7.18□□□□□ -1.26
BRCC3-208ENST00000453705 BORCS5Q969J3 196 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms