RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 PPA1Q15181 289 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 QPRTQ15274 297 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 TOMM34Q15785 309 aaPredicted RBP9.64□□□□□ -0.87
USP1-204ENST00000452143 UGT3A2Q3SY77 523 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 SPDYE7PQ495Y7 208 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 ATP6AP1LQ52LC2 224 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 ARL13AQ5H913 290 aaPredicted RBP9.64□□□□□ -0.87
USP1-204ENST00000452143 PODNL1Q6PEZ8 512 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 ZNF614Q8N883 585 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 OR7A2PQ8NGA2 310 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 KIF18AQ8NI77 898 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 SLC25A43Q8WUT9 341 aaPredicted RBP9.64□□□□□ -0.87
USP1-204ENST00000452143 OIT3Q8WWZ8 545 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 ST8SIA1Q92185 356 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 MUCL1Q96DR8 90 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 APOPT1Q96IL0 206 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 PRPF18Q99633 342 aaKnown RBP9.64□□□□□ -0.87
USP1-204ENST00000452143 RHOXF2Q9BQY4 288 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 C12orf65Q9H3J6 166 aaKnown RBP9.64□□□□□ -0.87
USP1-204ENST00000452143 ANKZF1Q9H8Y5 726 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 EMC3Q9P0I2 261 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 TRAF6Q9Y4K3 522 aa9.64□□□□□ -0.87
USP1-204ENST00000452143 NBEAL1Q6ZS30 2694 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 IGHV3-15A0A0B4J1V0 119 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 NPIPA5A0A0B4J1W7 369 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 A0A1W2PNR3 127 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 DPRXA6NFQ7 191 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 SERINC4A6NH21 518 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 OR5H1A6NKK0 313 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 SMIM23A6NLE4 172 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 DUXAA6NLW8 204 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 ESPNB1AK53 854 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 SHISA9B4DS77 424 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 NPIPA7E9PJI5 369 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 DNAJA2O60884 412 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 C6orf47O95873 294 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 IFNA2P01563 188 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 NPIPA8P0DM63 369 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 GGT1P19440 569 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 PRPS1L1P21108 318 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 CCR4P51679 360 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 CDH11P55287 796 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 C21orf58P58505 322 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 CSNK2A1P68400 391 aaPredicted RBP9.63□□□□□ -0.87
USP1-204ENST00000452143 FAPQ12884 760 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 SKP2Q13309 424 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 STK11Q15831 433 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 NDUFAF6Q330K2 333 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 TIGD2Q4W5G0 525 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 ABLIM2Q6H8Q1 611 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 GALNT5Q7Z7M9 940 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 ATG4DQ86TL0 474 aaPredicted RBP9.63□□□□□ -0.87
USP1-204ENST00000452143 HIPK1Q86Z02 1210 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 GSPT2Q8IYD1 628 aaKnown RBP9.63□□□□□ -0.87
USP1-204ENST00000452143 C4orf33Q8N1A6 199 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 MAPK1IP1LQ8NDC0 245 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 ATP6V1C2Q8NEY4 427 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 EPS8L3Q8TE67 593 aaKnown RBP9.63□□□□□ -0.87
USP1-204ENST00000452143 UBLCP1Q8WVY7 318 aaPredicted RBP9.63□□□□□ -0.87
USP1-204ENST00000452143 TMEM234Q8WY98 164 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 NEUROG1Q92886 237 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 COQ8BQ96D53 544 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 OR5B2Q96R09 309 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 OR7D2Q96RA2 312 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 BHLHE41Q9C0J9 482 aaPredicted RBP9.63□□□□□ -0.87
USP1-204ENST00000452143 SERINC1Q9NRX5 453 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 CISD1Q9NZ45 108 aaKnown RBP9.63□□□□□ -0.87
USP1-204ENST00000452143 PRSS50Q9UI38 385 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 MGAT4BQ9UQ53 548 aa9.63□□□□□ -0.87
USP1-204ENST00000452143 IGKV3D-15A0A087WSY6 115 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 ABCD4O14678 606 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 ADAM11O75078 769 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 PGM3O95394 542 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 H6PDO95479 791 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 CD8AP01732 235 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 IGHV1-2P23083 117 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 DIO1P49895 249 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 RNF144AP50876 292 aaPredicted RBP9.62□□□□□ -0.87
USP1-204ENST00000452143 PDK3Q15120 406 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 ZNF141Q15928 474 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 SYT14P1Q58G82 188 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 C6orf136Q5SQH8 315 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 PDZK1Q5T2W1 519 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 AGAP6Q5VW22 663 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 TMEM108Q6UXF1 575 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 ZNF100Q8IYN0 542 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 RIBC1Q8N443 379 aaPredicted RBP9.62□□□□□ -0.87
USP1-204ENST00000452143 FNDC5Q8NAU1 212 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 OR5D16Q8NGK9 328 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 OR5AK3PQ8NH89 298 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 RFWD2Q8NHY2 731 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 ADAD1Q96M93 576 aaKnown RBP9.62□□□□□ -0.87
USP1-204ENST00000452143 ZNF300Q96RE9 604 aaPredicted RBP9.62□□□□□ -0.87
USP1-204ENST00000452143 SDF2Q99470 211 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 C1orf50Q9BV19 199 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 LAT2Q9GZY6 243 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 NPAP1Q9NZP6 1156 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 SPIN1Q9Y657 262 aaPredicted RBP9.62□□□□□ -0.87
USP1-204ENST00000452143 KCNE3Q9Y6H6 103 aa9.62□□□□□ -0.87
USP1-204ENST00000452143 SVEP1Q4LDE5 3571 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms