RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 IL12AP29459 219 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 SESN3P58005 492 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 TXNL4AP83876 142 aaKnown RBP13.63□□□□□ -0.23
CHD3-205ENST00000449744 MERTKQ12866 999 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 MAPK14Q16539 360 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 RNF130Q86XS8 419 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 TUSC5Q8IXB3 177 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 SLC43A2Q8N370 569 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 OR5B2Q96R09 309 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 INPP5KQ9BT40 448 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 SAP130Q9H0E3 1048 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 QRSL1Q9H0R6 528 aaKnown RBP13.63□□□□□ -0.23
CHD3-205ENST00000449744 COQ10BQ9H8M1 238 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.63□□□□□ -0.23
CHD3-205ENST00000449744 KLHL13Q9P2N7 655 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 LIPT1Q9Y234 373 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 ABCA4P78363 2273 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 A0A1W2PNR3 127 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 ETV2O00321 342 aaPredicted RBP13.62□□□□□ -0.23
CHD3-205ENST00000449744 HMGN4O00479 90 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 DIAPH2O60879 1101 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 SLC22A3O75751 556 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 H6PDO95479 791 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 IL6P05231 212 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 GSNP06396 782 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 KLK2P20151 261 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 RYKP34925 604 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 PGM1P36871 562 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 CDKN2CP42773 168 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 RAC3P60763 192 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 CHRNEQ04844 493 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 FUT5Q11128 374 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 PDCD4Q53EL6 469 aaKnown RBP13.62□□□□□ -0.23
CHD3-205ENST00000449744 STAC2Q6ZMT1 411 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 FRRS1Q6ZNA5 592 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 PIWIL2Q8TC59 973 aaKnown RBP13.62□□□□□ -0.23
CHD3-205ENST00000449744 ZNF524Q96C55 264 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 TACO1Q9BSH4 297 aaKnown RBP13.62□□□□□ -0.23
CHD3-205ENST00000449744 GP6Q9HCN6 339 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 ACER3Q9NUN7 267 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 BEX4Q9NWD9 120 aaPredicted RBP13.62□□□□□ -0.23
CHD3-205ENST00000449744 KLHL9Q9P2J3 617 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 GPR52Q9Y2T5 361 aa13.62□□□□□ -0.23
CHD3-205ENST00000449744 SPIN1Q9Y657 262 aaPredicted RBP13.62□□□□□ -0.23
CHD3-205ENST00000449744 PRRC2AP48634 2157 aaKnown RBP13.62□□□□□ -0.23
CHD3-205ENST00000449744 IGHV3-15A0A0B4J1V0 119 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 RFXANKO14593 260 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 SIAH2O43255 324 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 DNAJA2O60884 412 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 ANP32DO95626 131 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 KRT75O95678 551 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 YES1P07947 543 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 TFPIP10646 304 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 NID1P14543 1247 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 CD53P19397 219 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 FPR1P21462 350 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 ENPP1P22413 925 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 KCNJ10P78508 379 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 GSTA3Q16772 222 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 BEX5Q5H9J7 111 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 PLEKHM3Q6ZWE6 761 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 NUFIP2Q7Z417 695 aaKnown RBP13.61□□□□□ -0.23
CHD3-205ENST00000449744 HMGN2P46Q86SG4 172 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 ARFGAP2Q8N6H7 521 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 ANKFN1Q8N957 763 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 PNPT1Q8TCS8 783 aaKnown RBP13.61□□□□□ -0.23
CHD3-205ENST00000449744 SLC25A43Q8WUT9 341 aaPredicted RBP13.61□□□□□ -0.23
CHD3-205ENST00000449744 MAELQ96JY0 434 aaKnown RBP13.61□□□□□ -0.23
CHD3-205ENST00000449744 MARK4Q96L34 752 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 TRNT1Q96Q11 434 aaKnown RBP13.61□□□□□ -0.23
CHD3-205ENST00000449744 TMUB1Q9BVT8 246 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 ACTR6Q9GZN1 396 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 OR10A4Q9H209 315 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 UBTD1Q9HAC8 227 aa13.61□□□□□ -0.23
CHD3-205ENST00000449744 KLF11O14901 512 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 UBDO15205 165 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 NR2F1P10589 423 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 PSMB1P20618 241 aaKnown RBP13.6□□□□□ -0.23
CHD3-205ENST00000449744 APOBEC1P41238 236 aaKnown RBP13.6□□□□□ -0.23
CHD3-205ENST00000449744 CSNK2A1P68400 391 aaPredicted RBP13.6□□□□□ -0.23
CHD3-205ENST00000449744 RASGEF1BQ0VAM2 473 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 GNA13Q14344 377 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 SYPL1Q16563 259 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 ACKR1Q16570 336 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 AGBL2Q5U5Z8 902 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 AP1ARQ63HQ0 302 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 DNAJC14Q6Y2X3 702 aaPredicted RBP13.6□□□□□ -0.23
CHD3-205ENST00000449744 LRRC74BQ6ZQY2 392 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 C22orf34Q6ZV56 151 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 GRINAQ7Z429 371 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 WFDC8Q8IUA0 241 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 FAM71CQ8NEG0 241 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 STEAP2Q8NFT2 490 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 ZNF75CPQ92670 426 aaPredicted RBP13.6□□□□□ -0.23
CHD3-205ENST00000449744 PIGTQ969N2 578 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 ZG16BQ96DA0 208 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 HDHD5Q9BXW7 423 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 RMND5AQ9H871 391 aa13.6□□□□□ -0.23
CHD3-205ENST00000449744 EXOSC3Q9NQT5 275 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms